Protein–RNA interactions for Protein: Q96DX8

RTP4, Receptor-transporting protein 4, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTP4Q96DX8 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC17.07■□□□□ 0.32
RTP4Q96DX8 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
RTP4Q96DX8 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC17.07■□□□□ 0.32
RTP4Q96DX8 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RTP4Q96DX8 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
RTP4Q96DX8 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC17.07■□□□□ 0.32
RTP4Q96DX8 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RTP4Q96DX8 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC17.07■□□□□ 0.32
RTP4Q96DX8 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
RTP4Q96DX8 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC17.07■□□□□ 0.32
RTP4Q96DX8 AL049840.3-201ENST00000602669 611 ntBASIC17.07■□□□□ 0.32
RTP4Q96DX8 MIR7706-201ENST00000613747 67 ntBASIC17.07■□□□□ 0.32
RTP4Q96DX8 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC17.07■□□□□ 0.32
RTP4Q96DX8 AC117500.6-201ENST00000624871 588 ntBASIC17.07■□□□□ 0.32
RTP4Q96DX8 PGM5P2-202ENST00000637225 1043 ntBASIC17.07■□□□□ 0.32
RTP4Q96DX8 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
RTP4Q96DX8 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC17.07■□□□□ 0.32
RTP4Q96DX8 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
RTP4Q96DX8 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RTP4Q96DX8 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RTP4Q96DX8 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC17.07■□□□□ 0.32
RTP4Q96DX8 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC17.07■□□□□ 0.32
RTP4Q96DX8 LINC01144-201ENST00000626198 1710 ntBASIC17.07■□□□□ 0.32
RTP4Q96DX8 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RTP4Q96DX8 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC17.07■□□□□ 0.32
RTP4Q96DX8 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RTP4Q96DX8 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC17.07■□□□□ 0.32
RTP4Q96DX8 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RTP4Q96DX8 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RTP4Q96DX8 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC17.06■□□□□ 0.32
RTP4Q96DX8 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
RTP4Q96DX8 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
RTP4Q96DX8 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC17.06■□□□□ 0.32
RTP4Q96DX8 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC17.06■□□□□ 0.32
RTP4Q96DX8 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC17.06■□□□□ 0.32
RTP4Q96DX8 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC17.06■□□□□ 0.32
RTP4Q96DX8 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RTP4Q96DX8 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC17.06■□□□□ 0.32
RTP4Q96DX8 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RTP4Q96DX8 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC17.06■□□□□ 0.32
RTP4Q96DX8 PCGF3-213ENST00000620529 1899 ntBASIC17.06■□□□□ 0.32
RTP4Q96DX8 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RTP4Q96DX8 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
RTP4Q96DX8 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
RTP4Q96DX8 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RTP4Q96DX8 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
RTP4Q96DX8 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC17.06■□□□□ 0.32
RTP4Q96DX8 POU5F1P6-201ENST00000466990 990 ntBASIC17.06■□□□□ 0.32
RTP4Q96DX8 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC17.06■□□□□ 0.32
RTP4Q96DX8 RPS29-206ENST00000557111 488 ntTSL 2 BASIC17.06■□□□□ 0.32
RTP4Q96DX8 AC012640.2-201ENST00000561606 901 ntBASIC17.06■□□□□ 0.32
RTP4Q96DX8 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC17.06■□□□□ 0.32
RTP4Q96DX8 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC17.06■□□□□ 0.32
RTP4Q96DX8 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC17.06■□□□□ 0.32
RTP4Q96DX8 PRKN-208ENST00000610470 531 ntTSL 2 BASIC17.06■□□□□ 0.32
RTP4Q96DX8 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC17.06■□□□□ 0.32
RTP4Q96DX8 PRKN-209ENST00000612485 225 ntTSL 5 BASIC17.06■□□□□ 0.32
RTP4Q96DX8 AC010654.1-201ENST00000615722 808 ntBASIC17.06■□□□□ 0.32
RTP4Q96DX8 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC17.06■□□□□ 0.32
RTP4Q96DX8 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC17.06■□□□□ 0.32
RTP4Q96DX8 MIR1199-201ENST00000621445 119 ntBASIC17.06■□□□□ 0.32
RTP4Q96DX8 FAM215A-202ENST00000632077 792 ntBASIC17.06■□□□□ 0.32
RTP4Q96DX8 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
RTP4Q96DX8 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC17.06■□□□□ 0.32
RTP4Q96DX8 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
RTP4Q96DX8 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
RTP4Q96DX8 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC17.06■□□□□ 0.32
RTP4Q96DX8 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RTP4Q96DX8 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RTP4Q96DX8 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC17.06■□□□□ 0.32
RTP4Q96DX8 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
RTP4Q96DX8 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
RTP4Q96DX8 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC17.06■□□□□ 0.32
RTP4Q96DX8 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RTP4Q96DX8 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RTP4Q96DX8 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC17.06■□□□□ 0.32
RTP4Q96DX8 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
RTP4Q96DX8 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RTP4Q96DX8 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
RTP4Q96DX8 AL596087.1-201ENST00000400979 1969 ntBASIC17.06■□□□□ 0.32
RTP4Q96DX8 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
RTP4Q96DX8 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
RTP4Q96DX8 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC17.06■□□□□ 0.32
RTP4Q96DX8 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
RTP4Q96DX8 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC17.05■□□□□ 0.32
RTP4Q96DX8 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
RTP4Q96DX8 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC17.05■□□□□ 0.32
RTP4Q96DX8 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RTP4Q96DX8 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
RTP4Q96DX8 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC17.05■□□□□ 0.32
RTP4Q96DX8 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
RTP4Q96DX8 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
RTP4Q96DX8 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
RTP4Q96DX8 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
RTP4Q96DX8 BLK-205ENST00000529894 2017 ntTSL 5 BASIC17.05■□□□□ 0.32
RTP4Q96DX8 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
RTP4Q96DX8 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RTP4Q96DX8 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
RTP4Q96DX8 AC106730.1-201ENST00000566722 1090 ntBASIC17.05■□□□□ 0.32
RTP4Q96DX8 LITAF-211ENST00000572255 516 ntTSL 4 BASIC17.05■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 58.3 ms