Protein–RNA interactions for Protein: Q96A23

CPNE4, Copine-4, humanhuman

Predicted RBP Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4Q96A23 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC15.07■□□□□ 0
CPNE4Q96A23 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC15.07■□□□□ 0
CPNE4Q96A23 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
CPNE4Q96A23 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC15.07■□□□□ 0
CPNE4Q96A23 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC15.07■□□□□ 0
CPNE4Q96A23 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CPNE4Q96A23 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC15.07■□□□□ 0
CPNE4Q96A23 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC15.07■□□□□ 0
CPNE4Q96A23 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CPNE4Q96A23 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC15.07■□□□□ 0
CPNE4Q96A23 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC15.06■□□□□ 0
CPNE4Q96A23 LINC00895-201ENST00000629028 1637 ntBASIC15.06■□□□□ 0
CPNE4Q96A23 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC15.06■□□□□ 0
CPNE4Q96A23 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC15.06■□□□□ 0
CPNE4Q96A23 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC15.06■□□□□ 0
CPNE4Q96A23 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
CPNE4Q96A23 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CPNE4Q96A23 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CPNE4Q96A23 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
CPNE4Q96A23 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC15.06■□□□□ 0
CPNE4Q96A23 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CPNE4Q96A23 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
CPNE4Q96A23 AC084018.2-201ENST00000613093 2607 ntBASIC15.06■□□□□ 0
CPNE4Q96A23 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
CPNE4Q96A23 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC15.06■□□□□ 0
CPNE4Q96A23 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
CPNE4Q96A23 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC15.06■□□□□ 0
CPNE4Q96A23 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC15.06■□□□□ 0
CPNE4Q96A23 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
CPNE4Q96A23 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
CPNE4Q96A23 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC15.06■□□□□ 0
CPNE4Q96A23 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC15.06■□□□□ 0
CPNE4Q96A23 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC15.06■□□□□ 0
CPNE4Q96A23 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC15.06■□□□□ 0
CPNE4Q96A23 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC15.06■□□□□ 0
CPNE4Q96A23 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC15.06■□□□□ 0
CPNE4Q96A23 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC15.06■□□□□ 0
CPNE4Q96A23 AC068137.2-201ENST00000605408 478 ntBASIC15.06■□□□□ 0
CPNE4Q96A23 WT1-AS_2.1-201ENST00000613208 137 ntBASIC15.06■□□□□ 0
CPNE4Q96A23 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC15.06■□□□□ 0
CPNE4Q96A23 AC092865.6-201ENST00000642101 219 ntBASIC15.06■□□□□ 0
CPNE4Q96A23 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CPNE4Q96A23 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CPNE4Q96A23 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC15.06■□□□□ 0
CPNE4Q96A23 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC15.06■□□□□ 0
CPNE4Q96A23 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC15.06■□□□□ 0
CPNE4Q96A23 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
CPNE4Q96A23 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC15.06■□□□□ 0
CPNE4Q96A23 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC15.06■□□□□ 0
CPNE4Q96A23 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC15.06■□□□□ 0
CPNE4Q96A23 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CPNE4Q96A23 SLC22A20-204ENST00000530038 1673 ntBASIC15.06■□□□□ 0
CPNE4Q96A23 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CPNE4Q96A23 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CPNE4Q96A23 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
CPNE4Q96A23 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ 0
CPNE4Q96A23 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
CPNE4Q96A23 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC15.05■□□□□ 0
CPNE4Q96A23 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ 0
CPNE4Q96A23 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC15.05■□□□□ 0
CPNE4Q96A23 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ 0
CPNE4Q96A23 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC15.05■□□□□ 0
CPNE4Q96A23 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC15.05■□□□□ 0
CPNE4Q96A23 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
CPNE4Q96A23 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC15.05■□□□□ -0
CPNE4Q96A23 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
CPNE4Q96A23 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
CPNE4Q96A23 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC15.05■□□□□ -0
CPNE4Q96A23 YBX2P1-201ENST00000394192 760 ntBASIC15.05■□□□□ -0
CPNE4Q96A23 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC15.05■□□□□ -0
CPNE4Q96A23 MTRF1LP2-201ENST00000506027 1122 ntBASIC15.05■□□□□ -0
CPNE4Q96A23 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC15.05■□□□□ -0
CPNE4Q96A23 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC15.05■□□□□ -0
CPNE4Q96A23 AC092865.5-201ENST00000545435 363 ntBASIC15.05■□□□□ -0
CPNE4Q96A23 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC15.05■□□□□ -0
CPNE4Q96A23 MIR3687-2-201ENST00000577708 61 ntBASIC15.05■□□□□ -0
CPNE4Q96A23 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC15.05■□□□□ -0
CPNE4Q96A23 MIR3687-1-201ENST00000614492 61 ntBASIC15.05■□□□□ -0
CPNE4Q96A23 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
CPNE4Q96A23 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC15.05■□□□□ -0
CPNE4Q96A23 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC15.05■□□□□ -0
CPNE4Q96A23 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
CPNE4Q96A23 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC15.05■□□□□ -0
CPNE4Q96A23 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC15.05■□□□□ -0
CPNE4Q96A23 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
CPNE4Q96A23 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
CPNE4Q96A23 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
CPNE4Q96A23 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
CPNE4Q96A23 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC15.05■□□□□ -0
CPNE4Q96A23 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
CPNE4Q96A23 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC15.05■□□□□ -0
CPNE4Q96A23 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC15.04■□□□□ -0
CPNE4Q96A23 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC15.04■□□□□ -0
CPNE4Q96A23 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC15.04■□□□□ -0
CPNE4Q96A23 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CPNE4Q96A23 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CPNE4Q96A23 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
CPNE4Q96A23 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC15.04■□□□□ -0
CPNE4Q96A23 PCDHB17P-201ENST00000539533 2393 ntBASIC15.04■□□□□ -0
CPNE4Q96A23 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 48.7 ms