Protein–RNA interactions for Protein: Q92529

SHC3, SHC-transforming protein 3, humanhuman

Predictions only

Length 594 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC3Q92529 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SHC3Q92529 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
SHC3Q92529 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SHC3Q92529 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
SHC3Q92529 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC17.84■□□□□ 0.45
SHC3Q92529 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC17.84■□□□□ 0.45
SHC3Q92529 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SHC3Q92529 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC17.84■□□□□ 0.45
SHC3Q92529 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SHC3Q92529 RNU1-129P-201ENST00000384064 167 ntBASIC17.84■□□□□ 0.45
SHC3Q92529 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
SHC3Q92529 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC17.84■□□□□ 0.45
SHC3Q92529 AC096734.2-201ENST00000562054 433 ntBASIC17.84■□□□□ 0.45
SHC3Q92529 AC034105.1-201ENST00000563488 319 ntBASIC17.84■□□□□ 0.45
SHC3Q92529 U1.21-201ENST00000580816 167 ntBASIC17.84■□□□□ 0.45
SHC3Q92529 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
SHC3Q92529 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
SHC3Q92529 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SHC3Q92529 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
SHC3Q92529 AL645728.2-201ENST00000641974 660 ntBASIC17.84■□□□□ 0.45
SHC3Q92529 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
SHC3Q92529 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC17.84■□□□□ 0.45
SHC3Q92529 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SHC3Q92529 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
SHC3Q92529 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
SHC3Q92529 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
SHC3Q92529 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC17.84■□□□□ 0.45
SHC3Q92529 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
SHC3Q92529 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC17.83■□□□□ 0.45
SHC3Q92529 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
SHC3Q92529 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
SHC3Q92529 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.45
SHC3Q92529 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
SHC3Q92529 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
SHC3Q92529 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
SHC3Q92529 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.45
SHC3Q92529 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC17.83■□□□□ 0.44
SHC3Q92529 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC17.83■□□□□ 0.44
SHC3Q92529 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
SHC3Q92529 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
SHC3Q92529 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
SHC3Q92529 DDT-204ENST00000404092 805 ntTSL 3 BASIC17.83■□□□□ 0.44
SHC3Q92529 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC17.83■□□□□ 0.44
SHC3Q92529 AL513480.1-201ENST00000451731 511 ntBASIC17.83■□□□□ 0.44
SHC3Q92529 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC17.83■□□□□ 0.44
SHC3Q92529 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC17.83■□□□□ 0.44
SHC3Q92529 RPL28-209ENST00000560055 670 ntTSL 3 BASIC17.83■□□□□ 0.44
SHC3Q92529 AL031432.2-201ENST00000566714 459 ntBASIC17.83■□□□□ 0.44
SHC3Q92529 AL928711.1-201ENST00000570165 459 ntBASIC17.83■□□□□ 0.44
SHC3Q92529 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
SHC3Q92529 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.44
SHC3Q92529 GCK-209ENST00000616242 2260 ntTSL 5 BASIC17.83■□□□□ 0.44
SHC3Q92529 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
SHC3Q92529 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
SHC3Q92529 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
SHC3Q92529 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
SHC3Q92529 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
SHC3Q92529 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC17.83■□□□□ 0.44
SHC3Q92529 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
SHC3Q92529 MTHFR-217ENST00000641820 1569 ntBASIC17.83■□□□□ 0.44
SHC3Q92529 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC17.82■□□□□ 0.44
SHC3Q92529 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
SHC3Q92529 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SHC3Q92529 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SHC3Q92529 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
SHC3Q92529 AC104109.2-201ENST00000602919 1418 ntBASIC17.82■□□□□ 0.44
SHC3Q92529 PCGF3-213ENST00000620529 1899 ntBASIC17.82■□□□□ 0.44
SHC3Q92529 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SHC3Q92529 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SHC3Q92529 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SHC3Q92529 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
SHC3Q92529 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
SHC3Q92529 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC17.82■□□□□ 0.44
SHC3Q92529 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC17.82■□□□□ 0.44
SHC3Q92529 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
SHC3Q92529 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SHC3Q92529 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
SHC3Q92529 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC17.82■□□□□ 0.44
SHC3Q92529 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC17.82■□□□□ 0.44
SHC3Q92529 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SHC3Q92529 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC17.82■□□□□ 0.44
SHC3Q92529 MIR3909-201ENST00000579518 119 ntBASIC17.82■□□□□ 0.44
SHC3Q92529 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC17.82■□□□□ 0.44
SHC3Q92529 KLK8-205ENST00000593490 267 ntTSL 3 BASIC17.82■□□□□ 0.44
SHC3Q92529 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC17.82■□□□□ 0.44
SHC3Q92529 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
SHC3Q92529 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC17.82■□□□□ 0.44
SHC3Q92529 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
SHC3Q92529 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
SHC3Q92529 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SHC3Q92529 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SHC3Q92529 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
SHC3Q92529 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SHC3Q92529 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SHC3Q92529 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SHC3Q92529 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SHC3Q92529 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
SHC3Q92529 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SHC3Q92529 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SHC3Q92529 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms