Protein–RNA interactions for Protein: Q8WWV3

RTN4IP1, Reticulon-4-interacting protein 1, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1Q8WWV3 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
RTN4IP1Q8WWV3 AC068587.6-202ENST00000641839 5619 ntBASIC14.17□□□□□ -0.14
RTN4IP1Q8WWV3 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RTN4IP1Q8WWV3 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
RTN4IP1Q8WWV3 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RTN4IP1Q8WWV3 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
RTN4IP1Q8WWV3 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
RTN4IP1Q8WWV3 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
RTN4IP1Q8WWV3 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
RTN4IP1Q8WWV3 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RTN4IP1Q8WWV3 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
RTN4IP1Q8WWV3 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RTN4IP1Q8WWV3 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC14.17□□□□□ -0.14
RTN4IP1Q8WWV3 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC14.17□□□□□ -0.14
RTN4IP1Q8WWV3 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
RTN4IP1Q8WWV3 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
RTN4IP1Q8WWV3 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC14.17□□□□□ -0.14
RTN4IP1Q8WWV3 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC14.17□□□□□ -0.14
RTN4IP1Q8WWV3 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC14.17□□□□□ -0.14
RTN4IP1Q8WWV3 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC14.17□□□□□ -0.14
RTN4IP1Q8WWV3 FICD-205ENST00000552758 603 ntTSL 2 BASIC14.17□□□□□ -0.14
RTN4IP1Q8WWV3 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC14.17□□□□□ -0.14
RTN4IP1Q8WWV3 MIR3652-201ENST00000579335 131 ntBASIC14.17□□□□□ -0.14
RTN4IP1Q8WWV3 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC14.17□□□□□ -0.14
RTN4IP1Q8WWV3 AC138894.3-201ENST00000603787 634 ntBASIC14.17□□□□□ -0.14
RTN4IP1Q8WWV3 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC14.17□□□□□ -0.14
RTN4IP1Q8WWV3 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC14.17□□□□□ -0.14
RTN4IP1Q8WWV3 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC14.17□□□□□ -0.14
RTN4IP1Q8WWV3 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
RTN4IP1Q8WWV3 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RTN4IP1Q8WWV3 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RTN4IP1Q8WWV3 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC14.17□□□□□ -0.14
RTN4IP1Q8WWV3 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
RTN4IP1Q8WWV3 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RTN4IP1Q8WWV3 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
RTN4IP1Q8WWV3 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
RTN4IP1Q8WWV3 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC14.17□□□□□ -0.14
RTN4IP1Q8WWV3 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RTN4IP1Q8WWV3 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RTN4IP1Q8WWV3 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
RTN4IP1Q8WWV3 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC14.17□□□□□ -0.14
RTN4IP1Q8WWV3 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RTN4IP1Q8WWV3 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RTN4IP1Q8WWV3 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
RTN4IP1Q8WWV3 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
RTN4IP1Q8WWV3 LINC00554-201ENST00000564841 3011 ntBASIC14.17□□□□□ -0.14
RTN4IP1Q8WWV3 AL645728.1-201ENST00000366221 2101 ntBASIC14.17□□□□□ -0.14
RTN4IP1Q8WWV3 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC14.17□□□□□ -0.14
RTN4IP1Q8WWV3 TUBB8P12-201ENST00000308911 1335 ntBASIC14.16□□□□□ -0.14
RTN4IP1Q8WWV3 TUBB7P-202ENST00000428444 1305 ntBASIC14.16□□□□□ -0.14
RTN4IP1Q8WWV3 TUBB8P7-204ENST00000567960 1332 ntBASIC14.16□□□□□ -0.14
RTN4IP1Q8WWV3 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RTN4IP1Q8WWV3 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
RTN4IP1Q8WWV3 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
RTN4IP1Q8WWV3 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
RTN4IP1Q8WWV3 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RTN4IP1Q8WWV3 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RTN4IP1Q8WWV3 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC14.16□□□□□ -0.14
RTN4IP1Q8WWV3 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RTN4IP1Q8WWV3 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
RTN4IP1Q8WWV3 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RTN4IP1Q8WWV3 FUOM-202ENST00000368551 628 ntTSL 3 BASIC14.16□□□□□ -0.14
RTN4IP1Q8WWV3 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
RTN4IP1Q8WWV3 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC14.16□□□□□ -0.14
RTN4IP1Q8WWV3 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC14.16□□□□□ -0.14
RTN4IP1Q8WWV3 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC14.16□□□□□ -0.14
RTN4IP1Q8WWV3 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC14.16□□□□□ -0.14
RTN4IP1Q8WWV3 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC14.16□□□□□ -0.14
RTN4IP1Q8WWV3 NMU-205ENST00000511469 756 ntTSL 3 BASIC14.16□□□□□ -0.14
RTN4IP1Q8WWV3 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC14.16□□□□□ -0.14
RTN4IP1Q8WWV3 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC14.16□□□□□ -0.14
RTN4IP1Q8WWV3 GZMM-202ENST00000592501 941 ntTSL 3 BASIC14.16□□□□□ -0.14
RTN4IP1Q8WWV3 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RTN4IP1Q8WWV3 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RTN4IP1Q8WWV3 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
RTN4IP1Q8WWV3 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
RTN4IP1Q8WWV3 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
RTN4IP1Q8WWV3 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
RTN4IP1Q8WWV3 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RTN4IP1Q8WWV3 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
RTN4IP1Q8WWV3 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC14.16□□□□□ -0.14
RTN4IP1Q8WWV3 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC14.16□□□□□ -0.14
RTN4IP1Q8WWV3 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC14.16□□□□□ -0.14
RTN4IP1Q8WWV3 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC14.16□□□□□ -0.14
RTN4IP1Q8WWV3 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
RTN4IP1Q8WWV3 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC14.16□□□□□ -0.14
RTN4IP1Q8WWV3 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RTN4IP1Q8WWV3 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RTN4IP1Q8WWV3 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC14.15□□□□□ -0.14
RTN4IP1Q8WWV3 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RTN4IP1Q8WWV3 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RTN4IP1Q8WWV3 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
RTN4IP1Q8WWV3 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RTN4IP1Q8WWV3 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC14.15□□□□□ -0.14
RTN4IP1Q8WWV3 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
RTN4IP1Q8WWV3 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RTN4IP1Q8WWV3 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC14.15□□□□□ -0.14
RTN4IP1Q8WWV3 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RTN4IP1Q8WWV3 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RTN4IP1Q8WWV3 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC14.15□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms