Protein–RNA interactions for Protein: Q8NET4

RTL9, Retrotransposon Gag-like protein 9, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL9Q8NET4 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
RTL9Q8NET4 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
RTL9Q8NET4 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
RTL9Q8NET4 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC20.49■□□□□ 0.87
RTL9Q8NET4 MRPS18AP1-201ENST00000414458 589 ntBASIC20.49■□□□□ 0.87
RTL9Q8NET4 VMO1-203ENST00000416307 712 ntTSL 2 BASIC20.49■□□□□ 0.87
RTL9Q8NET4 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
RTL9Q8NET4 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC20.49■□□□□ 0.87
RTL9Q8NET4 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC20.49■□□□□ 0.87
RTL9Q8NET4 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
RTL9Q8NET4 SPTSSB-204ENST00000617024 1292 ntBASIC20.49■□□□□ 0.87
RTL9Q8NET4 GPER1-207ENST00000619052 571 ntTSL 2 BASIC20.49■□□□□ 0.87
RTL9Q8NET4 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
RTL9Q8NET4 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC20.49■□□□□ 0.87
RTL9Q8NET4 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
RTL9Q8NET4 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
RTL9Q8NET4 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
RTL9Q8NET4 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
RTL9Q8NET4 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
RTL9Q8NET4 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
RTL9Q8NET4 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
RTL9Q8NET4 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
RTL9Q8NET4 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
RTL9Q8NET4 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
RTL9Q8NET4 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
RTL9Q8NET4 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
RTL9Q8NET4 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
RTL9Q8NET4 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC20.49■□□□□ 0.87
RTL9Q8NET4 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
RTL9Q8NET4 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
RTL9Q8NET4 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC20.48■□□□□ 0.87
RTL9Q8NET4 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
RTL9Q8NET4 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
RTL9Q8NET4 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
RTL9Q8NET4 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
RTL9Q8NET4 GOLGA6L11P-201ENST00000417252 1298 ntBASIC20.48■□□□□ 0.87
RTL9Q8NET4 HLA-V-204ENST00000476601 1289 ntBASIC20.48■□□□□ 0.87
RTL9Q8NET4 AC098859.1-201ENST00000502915 1238 ntBASIC20.48■□□□□ 0.87
RTL9Q8NET4 LY6E-204ENST00000519546 971 ntTSL 2 BASIC20.48■□□□□ 0.87
RTL9Q8NET4 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
RTL9Q8NET4 BANF1P1-201ENST00000553684 263 ntBASIC20.48■□□□□ 0.87
RTL9Q8NET4 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC20.48■□□□□ 0.87
RTL9Q8NET4 FHL2-212ENST00000607522 759 ntTSL 2 BASIC20.48■□□□□ 0.87
RTL9Q8NET4 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
RTL9Q8NET4 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
RTL9Q8NET4 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC20.48■□□□□ 0.87
RTL9Q8NET4 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC20.48■□□□□ 0.87
RTL9Q8NET4 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
RTL9Q8NET4 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
RTL9Q8NET4 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
RTL9Q8NET4 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
RTL9Q8NET4 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC20.48■□□□□ 0.87
RTL9Q8NET4 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
RTL9Q8NET4 GOLGA2P9-201ENST00000596977 1937 ntBASIC20.48■□□□□ 0.87
RTL9Q8NET4 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
RTL9Q8NET4 GRAMD4P3-201ENST00000621665 1669 ntBASIC20.48■□□□□ 0.87
RTL9Q8NET4 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC20.48■□□□□ 0.87
RTL9Q8NET4 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC20.48■□□□□ 0.87
RTL9Q8NET4 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
RTL9Q8NET4 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC20.47■□□□□ 0.87
RTL9Q8NET4 AC241585.1-201ENST00000433527 519 ntBASIC20.47■□□□□ 0.87
RTL9Q8NET4 CRB3P1-201ENST00000449338 276 ntBASIC20.47■□□□□ 0.87
RTL9Q8NET4 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
RTL9Q8NET4 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC20.47■□□□□ 0.87
RTL9Q8NET4 AL391256.1-201ENST00000443260 1855 ntBASIC20.47■□□□□ 0.87
RTL9Q8NET4 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
RTL9Q8NET4 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC20.47■□□□□ 0.87
RTL9Q8NET4 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
RTL9Q8NET4 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
RTL9Q8NET4 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
RTL9Q8NET4 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
RTL9Q8NET4 AL512652.2-201ENST00000625156 1716 ntBASIC20.47■□□□□ 0.87
RTL9Q8NET4 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
RTL9Q8NET4 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
RTL9Q8NET4 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
RTL9Q8NET4 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
RTL9Q8NET4 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
RTL9Q8NET4 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
RTL9Q8NET4 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
RTL9Q8NET4 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
RTL9Q8NET4 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
RTL9Q8NET4 AC100757.3-201ENST00000622361 1406 ntBASIC20.47■□□□□ 0.87
RTL9Q8NET4 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
RTL9Q8NET4 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
RTL9Q8NET4 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
RTL9Q8NET4 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
RTL9Q8NET4 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
RTL9Q8NET4 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC20.47■□□□□ 0.87
RTL9Q8NET4 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
RTL9Q8NET4 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
RTL9Q8NET4 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC20.46■□□□□ 0.87
RTL9Q8NET4 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC20.46■□□□□ 0.87
RTL9Q8NET4 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC20.46■□□□□ 0.87
RTL9Q8NET4 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC20.46■□□□□ 0.87
RTL9Q8NET4 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC20.46■□□□□ 0.87
RTL9Q8NET4 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC20.46■□□□□ 0.87
RTL9Q8NET4 SERBP1P5-201ENST00000510079 1181 ntBASIC20.46■□□□□ 0.87
RTL9Q8NET4 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC20.46■□□□□ 0.87
RTL9Q8NET4 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC20.46■□□□□ 0.87
RTL9Q8NET4 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC20.46■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms