Protein–RNA interactions for Protein: Q8N8F7

LSMEM1, Leucine-rich single-pass membrane protein 1, humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSMEM1Q8N8F7 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
LSMEM1Q8N8F7 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC15.4■□□□□ 0.06
LSMEM1Q8N8F7 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
LSMEM1Q8N8F7 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC15.4■□□□□ 0.06
LSMEM1Q8N8F7 KRT18P56-201ENST00000507275 550 ntBASIC15.4■□□□□ 0.06
LSMEM1Q8N8F7 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC15.4■□□□□ 0.06
LSMEM1Q8N8F7 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC15.4■□□□□ 0.06
LSMEM1Q8N8F7 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
LSMEM1Q8N8F7 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC15.4■□□□□ 0.06
LSMEM1Q8N8F7 AC012313.10-201ENST00000623509 926 ntBASIC15.4■□□□□ 0.06
LSMEM1Q8N8F7 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC15.4■□□□□ 0.06
LSMEM1Q8N8F7 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
LSMEM1Q8N8F7 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
LSMEM1Q8N8F7 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
LSMEM1Q8N8F7 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC15.4■□□□□ 0.06
LSMEM1Q8N8F7 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
LSMEM1Q8N8F7 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
LSMEM1Q8N8F7 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
LSMEM1Q8N8F7 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
LSMEM1Q8N8F7 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
LSMEM1Q8N8F7 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
LSMEM1Q8N8F7 ZFHX2-205ENST00000615307 1972 ntTSL 2 BASIC15.4■□□□□ 0.06
LSMEM1Q8N8F7 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC15.4■□□□□ 0.06
LSMEM1Q8N8F7 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC15.4■□□□□ 0.06
LSMEM1Q8N8F7 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC15.4■□□□□ 0.06
LSMEM1Q8N8F7 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
LSMEM1Q8N8F7 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
LSMEM1Q8N8F7 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
LSMEM1Q8N8F7 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
LSMEM1Q8N8F7 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
LSMEM1Q8N8F7 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
LSMEM1Q8N8F7 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
LSMEM1Q8N8F7 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
LSMEM1Q8N8F7 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
LSMEM1Q8N8F7 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC15.39■□□□□ 0.05
LSMEM1Q8N8F7 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC15.39■□□□□ 0.05
LSMEM1Q8N8F7 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
LSMEM1Q8N8F7 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
LSMEM1Q8N8F7 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
LSMEM1Q8N8F7 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
LSMEM1Q8N8F7 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
LSMEM1Q8N8F7 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
LSMEM1Q8N8F7 AC073621.1-201ENST00000392730 636 ntBASIC15.39■□□□□ 0.05
LSMEM1Q8N8F7 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
LSMEM1Q8N8F7 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC15.39■□□□□ 0.05
LSMEM1Q8N8F7 ELK2BP-201ENST00000415014 1224 ntBASIC15.39■□□□□ 0.05
LSMEM1Q8N8F7 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC15.39■□□□□ 0.05
LSMEM1Q8N8F7 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC15.39■□□□□ 0.05
LSMEM1Q8N8F7 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC15.39■□□□□ 0.05
LSMEM1Q8N8F7 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC15.39■□□□□ 0.05
LSMEM1Q8N8F7 ETFA-208ENST00000559602 792 ntTSL 3 BASIC15.39■□□□□ 0.05
LSMEM1Q8N8F7 AC091167.2-201ENST00000579581 588 ntBASIC15.39■□□□□ 0.05
LSMEM1Q8N8F7 MIR4492-201ENST00000581627 80 ntBASIC15.39■□□□□ 0.05
LSMEM1Q8N8F7 MPDU1-223ENST00000582151 728 ntBASIC15.39■□□□□ 0.05
LSMEM1Q8N8F7 GGTLC5P-201ENST00000617623 998 ntBASIC15.39■□□□□ 0.05
LSMEM1Q8N8F7 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC15.39■□□□□ 0.05
LSMEM1Q8N8F7 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
LSMEM1Q8N8F7 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC15.39■□□□□ 0.05
LSMEM1Q8N8F7 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC15.39■□□□□ 0.05
LSMEM1Q8N8F7 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
LSMEM1Q8N8F7 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
LSMEM1Q8N8F7 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC15.39■□□□□ 0.05
LSMEM1Q8N8F7 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC15.39■□□□□ 0.05
LSMEM1Q8N8F7 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
LSMEM1Q8N8F7 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
LSMEM1Q8N8F7 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC15.39■□□□□ 0.05
LSMEM1Q8N8F7 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
LSMEM1Q8N8F7 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
LSMEM1Q8N8F7 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
LSMEM1Q8N8F7 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
LSMEM1Q8N8F7 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC15.38■□□□□ 0.05
LSMEM1Q8N8F7 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
LSMEM1Q8N8F7 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
LSMEM1Q8N8F7 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
LSMEM1Q8N8F7 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC15.38■□□□□ 0.05
LSMEM1Q8N8F7 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC15.38■□□□□ 0.05
LSMEM1Q8N8F7 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
LSMEM1Q8N8F7 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC15.38■□□□□ 0.05
LSMEM1Q8N8F7 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC15.38■□□□□ 0.05
LSMEM1Q8N8F7 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
LSMEM1Q8N8F7 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC15.38■□□□□ 0.05
LSMEM1Q8N8F7 AC073648.2-201ENST00000510116 352 ntBASIC15.38■□□□□ 0.05
LSMEM1Q8N8F7 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC15.38■□□□□ 0.05
LSMEM1Q8N8F7 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
LSMEM1Q8N8F7 OR7E14P-202ENST00000530490 1290 ntBASIC15.38■□□□□ 0.05
LSMEM1Q8N8F7 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC15.38■□□□□ 0.05
LSMEM1Q8N8F7 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
LSMEM1Q8N8F7 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC15.38■□□□□ 0.05
LSMEM1Q8N8F7 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC15.38■□□□□ 0.05
LSMEM1Q8N8F7 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC15.38■□□□□ 0.05
LSMEM1Q8N8F7 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC15.38■□□□□ 0.05
LSMEM1Q8N8F7 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC15.38■□□□□ 0.05
LSMEM1Q8N8F7 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
LSMEM1Q8N8F7 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
LSMEM1Q8N8F7 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
LSMEM1Q8N8F7 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC15.38■□□□□ 0.05
LSMEM1Q8N8F7 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
LSMEM1Q8N8F7 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
LSMEM1Q8N8F7 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC15.38■□□□□ 0.05
LSMEM1Q8N8F7 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC15.38■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms