Protein–RNA interactions for Protein: Q8N6Y1

PCDH20, Protocadherin-20, humanhuman

Known RBP Predictions only

Length 951 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH20Q8N6Y1 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
PCDH20Q8N6Y1 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PCDH20Q8N6Y1 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
PCDH20Q8N6Y1 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC17.14■□□□□ 0.33
PCDH20Q8N6Y1 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PCDH20Q8N6Y1 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC17.14■□□□□ 0.33
PCDH20Q8N6Y1 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
PCDH20Q8N6Y1 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PCDH20Q8N6Y1 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
PCDH20Q8N6Y1 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
PCDH20Q8N6Y1 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
PCDH20Q8N6Y1 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC17.13■□□□□ 0.33
PCDH20Q8N6Y1 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
PCDH20Q8N6Y1 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC17.13■□□□□ 0.33
PCDH20Q8N6Y1 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PCDH20Q8N6Y1 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PCDH20Q8N6Y1 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC17.13■□□□□ 0.33
PCDH20Q8N6Y1 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC17.13■□□□□ 0.33
PCDH20Q8N6Y1 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PCDH20Q8N6Y1 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PCDH20Q8N6Y1 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PCDH20Q8N6Y1 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC17.13■□□□□ 0.33
PCDH20Q8N6Y1 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
PCDH20Q8N6Y1 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PCDH20Q8N6Y1 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC17.13■□□□□ 0.33
PCDH20Q8N6Y1 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
PCDH20Q8N6Y1 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
PCDH20Q8N6Y1 NMU-203ENST00000507338 658 ntTSL 3 BASIC17.13■□□□□ 0.33
PCDH20Q8N6Y1 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC17.13■□□□□ 0.33
PCDH20Q8N6Y1 AC005829.1-201ENST00000570002 483 ntBASIC17.13■□□□□ 0.33
PCDH20Q8N6Y1 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
PCDH20Q8N6Y1 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PCDH20Q8N6Y1 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
PCDH20Q8N6Y1 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
PCDH20Q8N6Y1 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
PCDH20Q8N6Y1 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
PCDH20Q8N6Y1 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
PCDH20Q8N6Y1 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
PCDH20Q8N6Y1 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PCDH20Q8N6Y1 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PCDH20Q8N6Y1 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PCDH20Q8N6Y1 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PCDH20Q8N6Y1 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC17.12■□□□□ 0.33
PCDH20Q8N6Y1 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PCDH20Q8N6Y1 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
PCDH20Q8N6Y1 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PCDH20Q8N6Y1 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PCDH20Q8N6Y1 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
PCDH20Q8N6Y1 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
PCDH20Q8N6Y1 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC17.12■□□□□ 0.33
PCDH20Q8N6Y1 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PCDH20Q8N6Y1 AC012569.1-201ENST00000591191 1524 ntBASIC17.12■□□□□ 0.33
PCDH20Q8N6Y1 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PCDH20Q8N6Y1 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
PCDH20Q8N6Y1 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
PCDH20Q8N6Y1 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PCDH20Q8N6Y1 AC092053.1-201ENST00000605787 1936 ntBASIC17.12■□□□□ 0.33
PCDH20Q8N6Y1 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PCDH20Q8N6Y1 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PCDH20Q8N6Y1 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC17.12■□□□□ 0.33
PCDH20Q8N6Y1 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC17.12■□□□□ 0.33
PCDH20Q8N6Y1 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC17.12■□□□□ 0.33
PCDH20Q8N6Y1 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC17.12■□□□□ 0.33
PCDH20Q8N6Y1 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC17.12■□□□□ 0.33
PCDH20Q8N6Y1 DHDH-204ENST00000523250 634 ntTSL 5 BASIC17.12■□□□□ 0.33
PCDH20Q8N6Y1 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC17.12■□□□□ 0.33
PCDH20Q8N6Y1 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PCDH20Q8N6Y1 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PCDH20Q8N6Y1 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PCDH20Q8N6Y1 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PCDH20Q8N6Y1 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PCDH20Q8N6Y1 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC17.12■□□□□ 0.33
PCDH20Q8N6Y1 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PCDH20Q8N6Y1 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PCDH20Q8N6Y1 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC17.12■□□□□ 0.33
PCDH20Q8N6Y1 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC17.11■□□□□ 0.33
PCDH20Q8N6Y1 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC17.11■□□□□ 0.33
PCDH20Q8N6Y1 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC17.11■□□□□ 0.33
PCDH20Q8N6Y1 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC17.11■□□□□ 0.33
PCDH20Q8N6Y1 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PCDH20Q8N6Y1 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC17.11■□□□□ 0.33
PCDH20Q8N6Y1 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PCDH20Q8N6Y1 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
PCDH20Q8N6Y1 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PCDH20Q8N6Y1 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PCDH20Q8N6Y1 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
PCDH20Q8N6Y1 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC17.11■□□□□ 0.33
PCDH20Q8N6Y1 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
PCDH20Q8N6Y1 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
PCDH20Q8N6Y1 HTR5BP-201ENST00000430851 1154 ntBASIC17.11■□□□□ 0.33
PCDH20Q8N6Y1 ALG1L5P-201ENST00000482043 771 ntBASIC17.11■□□□□ 0.33
PCDH20Q8N6Y1 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC17.11■□□□□ 0.33
PCDH20Q8N6Y1 YBX1P5-201ENST00000509441 847 ntBASIC17.11■□□□□ 0.33
PCDH20Q8N6Y1 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC17.11■□□□□ 0.33
PCDH20Q8N6Y1 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC17.11■□□□□ 0.33
PCDH20Q8N6Y1 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PCDH20Q8N6Y1 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC17.11■□□□□ 0.33
PCDH20Q8N6Y1 MPDU1-223ENST00000582151 728 ntBASIC17.11■□□□□ 0.33
PCDH20Q8N6Y1 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC17.11■□□□□ 0.33
PCDH20Q8N6Y1 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC17.11■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms