Protein–RNA interactions for Protein: Q8IZ52

CHPF, Chondroitin sulfate synthase 2, humanhuman

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHPFQ8IZ52 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
CHPFQ8IZ52 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
CHPFQ8IZ52 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC17.04■□□□□ 0.32
CHPFQ8IZ52 TUBB3P1-201ENST00000405796 1332 ntBASIC17.04■□□□□ 0.32
CHPFQ8IZ52 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC17.04■□□□□ 0.32
CHPFQ8IZ52 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
CHPFQ8IZ52 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
CHPFQ8IZ52 SLC25A1P3-201ENST00000395415 828 ntBASIC17.04■□□□□ 0.32
CHPFQ8IZ52 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC17.04■□□□□ 0.32
CHPFQ8IZ52 PMS2P4-201ENST00000412466 1052 ntBASIC17.04■□□□□ 0.32
CHPFQ8IZ52 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC17.04■□□□□ 0.32
CHPFQ8IZ52 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC17.04■□□□□ 0.32
CHPFQ8IZ52 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CHPFQ8IZ52 AC093214.1-201ENST00000511688 1107 ntBASIC17.04■□□□□ 0.32
CHPFQ8IZ52 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC17.04■□□□□ 0.32
CHPFQ8IZ52 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC17.04■□□□□ 0.32
CHPFQ8IZ52 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC17.04■□□□□ 0.32
CHPFQ8IZ52 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
CHPFQ8IZ52 AC069262.1-201ENST00000539058 672 ntBASIC17.04■□□□□ 0.32
CHPFQ8IZ52 AL512356.2-201ENST00000546955 174 ntBASIC17.04■□□□□ 0.32
CHPFQ8IZ52 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC17.04■□□□□ 0.32
CHPFQ8IZ52 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC17.04■□□□□ 0.32
CHPFQ8IZ52 AC141586.5-201ENST00000624546 2050 ntBASIC17.04■□□□□ 0.32
CHPFQ8IZ52 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
CHPFQ8IZ52 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC17.04■□□□□ 0.32
CHPFQ8IZ52 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC17.04■□□□□ 0.32
CHPFQ8IZ52 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
CHPFQ8IZ52 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CHPFQ8IZ52 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC17.04■□□□□ 0.32
CHPFQ8IZ52 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC17.04■□□□□ 0.32
CHPFQ8IZ52 AC116353.5-201ENST00000638148 1699 ntBASIC17.04■□□□□ 0.32
CHPFQ8IZ52 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CHPFQ8IZ52 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC17.03■□□□□ 0.32
CHPFQ8IZ52 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
CHPFQ8IZ52 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC17.03■□□□□ 0.32
CHPFQ8IZ52 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CHPFQ8IZ52 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC17.03■□□□□ 0.32
CHPFQ8IZ52 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CHPFQ8IZ52 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC17.03■□□□□ 0.32
CHPFQ8IZ52 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CHPFQ8IZ52 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CHPFQ8IZ52 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CHPFQ8IZ52 CALY-203ENST00000368558 825 ntTSL 5 BASIC17.03■□□□□ 0.32
CHPFQ8IZ52 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
CHPFQ8IZ52 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CHPFQ8IZ52 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CHPFQ8IZ52 GPS2P2-201ENST00000430745 888 ntBASIC17.03■□□□□ 0.32
CHPFQ8IZ52 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC17.03■□□□□ 0.32
CHPFQ8IZ52 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC17.03■□□□□ 0.32
CHPFQ8IZ52 RNA5SP421-201ENST00000516864 134 ntBASIC17.03■□□□□ 0.32
CHPFQ8IZ52 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
CHPFQ8IZ52 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CHPFQ8IZ52 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC17.03■□□□□ 0.32
CHPFQ8IZ52 LINC01225-203ENST00000563550 1244 ntBASIC17.03■□□□□ 0.32
CHPFQ8IZ52 MPDU1-223ENST00000582151 728 ntBASIC17.03■□□□□ 0.32
CHPFQ8IZ52 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC17.03■□□□□ 0.32
CHPFQ8IZ52 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CHPFQ8IZ52 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC17.03■□□□□ 0.32
CHPFQ8IZ52 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
CHPFQ8IZ52 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CHPFQ8IZ52 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC17.03■□□□□ 0.32
CHPFQ8IZ52 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC17.03■□□□□ 0.32
CHPFQ8IZ52 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC17.03■□□□□ 0.32
CHPFQ8IZ52 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC17.03■□□□□ 0.32
CHPFQ8IZ52 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CHPFQ8IZ52 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CHPFQ8IZ52 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CHPFQ8IZ52 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC17.03■□□□□ 0.32
CHPFQ8IZ52 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
CHPFQ8IZ52 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
CHPFQ8IZ52 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC17.03■□□□□ 0.32
CHPFQ8IZ52 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CHPFQ8IZ52 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC17.02■□□□□ 0.32
CHPFQ8IZ52 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
CHPFQ8IZ52 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CHPFQ8IZ52 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
CHPFQ8IZ52 BANP-227ENST00000626016 2144 ntTSL 2 BASIC17.02■□□□□ 0.32
CHPFQ8IZ52 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
CHPFQ8IZ52 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CHPFQ8IZ52 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC17.02■□□□□ 0.32
CHPFQ8IZ52 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC17.02■□□□□ 0.32
CHPFQ8IZ52 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC17.02■□□□□ 0.32
CHPFQ8IZ52 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC17.02■□□□□ 0.32
CHPFQ8IZ52 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
CHPFQ8IZ52 CDK2AP2P3-201ENST00000422476 372 ntBASIC17.02■□□□□ 0.32
CHPFQ8IZ52 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC17.02■□□□□ 0.32
CHPFQ8IZ52 KLF2P3-201ENST00000451977 1087 ntBASIC17.02■□□□□ 0.32
CHPFQ8IZ52 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CHPFQ8IZ52 AC125807.1-201ENST00000483097 614 ntBASIC17.02■□□□□ 0.32
CHPFQ8IZ52 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC17.02■□□□□ 0.32
CHPFQ8IZ52 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC17.02■□□□□ 0.32
CHPFQ8IZ52 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC17.02■□□□□ 0.32
CHPFQ8IZ52 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC17.02■□□□□ 0.32
CHPFQ8IZ52 MIR3909-201ENST00000579518 119 ntBASIC17.02■□□□□ 0.32
CHPFQ8IZ52 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CHPFQ8IZ52 INO80C-206ENST00000586489 594 ntTSL 3 BASIC17.02■□□□□ 0.32
CHPFQ8IZ52 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CHPFQ8IZ52 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC17.02■□□□□ 0.32
CHPFQ8IZ52 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CHPFQ8IZ52 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC17.02■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms