Protein–RNA interactions for Protein: Q8IXS2

CCDC65, Coiled-coil domain-containing protein 65, humanhuman

Predictions only

Length 484 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65Q8IXS2 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC18.61■□□□□ 0.57
CCDC65Q8IXS2 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CCDC65Q8IXS2 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CCDC65Q8IXS2 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
CCDC65Q8IXS2 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CCDC65Q8IXS2 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC18.61■□□□□ 0.57
CCDC65Q8IXS2 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC18.61■□□□□ 0.57
CCDC65Q8IXS2 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CCDC65Q8IXS2 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC18.61■□□□□ 0.57
CCDC65Q8IXS2 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CCDC65Q8IXS2 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.61■□□□□ 0.57
CCDC65Q8IXS2 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CCDC65Q8IXS2 CDK2AP2P3-201ENST00000422476 372 ntBASIC18.61■□□□□ 0.57
CCDC65Q8IXS2 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
CCDC65Q8IXS2 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC18.61■□□□□ 0.57
CCDC65Q8IXS2 FDX1P1-201ENST00000449115 551 ntBASIC18.61■□□□□ 0.57
CCDC65Q8IXS2 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
CCDC65Q8IXS2 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC18.61■□□□□ 0.57
CCDC65Q8IXS2 AC079776.4-201ENST00000511039 504 ntBASIC18.61■□□□□ 0.57
CCDC65Q8IXS2 Z83851.2-201ENST00000609564 659 ntBASIC18.61■□□□□ 0.57
CCDC65Q8IXS2 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC18.61■□□□□ 0.57
CCDC65Q8IXS2 ACTL9-202ENST00000612068 1252 ntBASIC18.61■□□□□ 0.57
CCDC65Q8IXS2 WT1-AS_2.1-201ENST00000613208 137 ntBASIC18.61■□□□□ 0.57
CCDC65Q8IXS2 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC18.61■□□□□ 0.57
CCDC65Q8IXS2 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CCDC65Q8IXS2 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC18.61■□□□□ 0.57
CCDC65Q8IXS2 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
CCDC65Q8IXS2 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CCDC65Q8IXS2 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CCDC65Q8IXS2 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
CCDC65Q8IXS2 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CCDC65Q8IXS2 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CCDC65Q8IXS2 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CCDC65Q8IXS2 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC18.61■□□□□ 0.57
CCDC65Q8IXS2 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC18.61■□□□□ 0.57
CCDC65Q8IXS2 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CCDC65Q8IXS2 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
CCDC65Q8IXS2 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC18.6■□□□□ 0.57
CCDC65Q8IXS2 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CCDC65Q8IXS2 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
CCDC65Q8IXS2 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CCDC65Q8IXS2 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC18.6■□□□□ 0.57
CCDC65Q8IXS2 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CCDC65Q8IXS2 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
CCDC65Q8IXS2 AC124067.4-201ENST00000519691 2379 ntBASIC18.6■□□□□ 0.57
CCDC65Q8IXS2 AL671710.1-201ENST00000610245 2349 ntBASIC18.6■□□□□ 0.57
CCDC65Q8IXS2 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CCDC65Q8IXS2 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC18.6■□□□□ 0.57
CCDC65Q8IXS2 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CCDC65Q8IXS2 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
CCDC65Q8IXS2 WDR53-204ENST00000433160 887 ntTSL 5 BASIC18.6■□□□□ 0.57
CCDC65Q8IXS2 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC18.6■□□□□ 0.57
CCDC65Q8IXS2 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CCDC65Q8IXS2 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CCDC65Q8IXS2 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC18.6■□□□□ 0.57
CCDC65Q8IXS2 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC18.6■□□□□ 0.57
CCDC65Q8IXS2 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC18.6■□□□□ 0.57
CCDC65Q8IXS2 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CCDC65Q8IXS2 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
CCDC65Q8IXS2 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC18.6■□□□□ 0.57
CCDC65Q8IXS2 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CCDC65Q8IXS2 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CCDC65Q8IXS2 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CCDC65Q8IXS2 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CCDC65Q8IXS2 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC18.59■□□□□ 0.57
CCDC65Q8IXS2 AC012569.1-201ENST00000591191 1524 ntBASIC18.59■□□□□ 0.57
CCDC65Q8IXS2 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CCDC65Q8IXS2 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC18.59■□□□□ 0.57
CCDC65Q8IXS2 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
CCDC65Q8IXS2 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CCDC65Q8IXS2 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CCDC65Q8IXS2 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC18.59■□□□□ 0.57
CCDC65Q8IXS2 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC18.59■□□□□ 0.57
CCDC65Q8IXS2 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC18.59■□□□□ 0.57
CCDC65Q8IXS2 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CCDC65Q8IXS2 STARD13-205ENST00000439831 945 ntTSL 2 BASIC18.59■□□□□ 0.57
CCDC65Q8IXS2 POLD4-207ENST00000531239 584 ntTSL 2 BASIC18.59■□□□□ 0.57
CCDC65Q8IXS2 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC18.59■□□□□ 0.57
CCDC65Q8IXS2 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC18.59■□□□□ 0.57
CCDC65Q8IXS2 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CCDC65Q8IXS2 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC18.59■□□□□ 0.57
CCDC65Q8IXS2 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
CCDC65Q8IXS2 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC18.59■□□□□ 0.57
CCDC65Q8IXS2 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC18.59■□□□□ 0.57
CCDC65Q8IXS2 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC18.59■□□□□ 0.57
CCDC65Q8IXS2 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC18.59■□□□□ 0.57
CCDC65Q8IXS2 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
CCDC65Q8IXS2 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
CCDC65Q8IXS2 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CCDC65Q8IXS2 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.57
CCDC65Q8IXS2 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CCDC65Q8IXS2 AL512652.2-201ENST00000625156 1716 ntBASIC18.58■□□□□ 0.57
CCDC65Q8IXS2 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
CCDC65Q8IXS2 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CCDC65Q8IXS2 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC18.58■□□□□ 0.57
CCDC65Q8IXS2 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC18.58■□□□□ 0.56
CCDC65Q8IXS2 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC18.58■□□□□ 0.56
CCDC65Q8IXS2 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC18.58■□□□□ 0.56
CCDC65Q8IXS2 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CCDC65Q8IXS2 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms