Protein–RNA interactions for Protein: Q8IWT1

SCN4B, Sodium channel subunit beta-4, humanhuman

Predictions only

Length 228 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4BQ8IWT1 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC17.65■□□□□ 0.42
SCN4BQ8IWT1 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
SCN4BQ8IWT1 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
SCN4BQ8IWT1 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC17.65■□□□□ 0.42
SCN4BQ8IWT1 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SCN4BQ8IWT1 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
SCN4BQ8IWT1 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SCN4BQ8IWT1 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SCN4BQ8IWT1 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SCN4BQ8IWT1 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC17.65■□□□□ 0.42
SCN4BQ8IWT1 AKAP8P1-201ENST00000434743 1349 ntBASIC17.65■□□□□ 0.42
SCN4BQ8IWT1 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SCN4BQ8IWT1 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
SCN4BQ8IWT1 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SCN4BQ8IWT1 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SCN4BQ8IWT1 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
SCN4BQ8IWT1 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
SCN4BQ8IWT1 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC17.64■□□□□ 0.42
SCN4BQ8IWT1 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.42
SCN4BQ8IWT1 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.42
SCN4BQ8IWT1 WASH6P-202ENST00000359512 1437 ntBASIC17.64■□□□□ 0.42
SCN4BQ8IWT1 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.42
SCN4BQ8IWT1 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
SCN4BQ8IWT1 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
SCN4BQ8IWT1 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
SCN4BQ8IWT1 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC17.64■□□□□ 0.41
SCN4BQ8IWT1 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SCN4BQ8IWT1 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SCN4BQ8IWT1 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
SCN4BQ8IWT1 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC17.64■□□□□ 0.41
SCN4BQ8IWT1 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC17.64■□□□□ 0.41
SCN4BQ8IWT1 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC17.64■□□□□ 0.41
SCN4BQ8IWT1 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SCN4BQ8IWT1 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SCN4BQ8IWT1 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SCN4BQ8IWT1 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SCN4BQ8IWT1 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC17.64■□□□□ 0.41
SCN4BQ8IWT1 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
SCN4BQ8IWT1 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
SCN4BQ8IWT1 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC17.64■□□□□ 0.41
SCN4BQ8IWT1 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC17.64■□□□□ 0.41
SCN4BQ8IWT1 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
SCN4BQ8IWT1 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
SCN4BQ8IWT1 AC004449.1-201ENST00000564240 433 ntBASIC17.64■□□□□ 0.41
SCN4BQ8IWT1 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC17.64■□□□□ 0.41
SCN4BQ8IWT1 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC17.64■□□□□ 0.41
SCN4BQ8IWT1 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC17.64■□□□□ 0.41
SCN4BQ8IWT1 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
SCN4BQ8IWT1 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SCN4BQ8IWT1 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
SCN4BQ8IWT1 AC006277.1-201ENST00000624348 1610 ntBASIC17.64■□□□□ 0.41
SCN4BQ8IWT1 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
SCN4BQ8IWT1 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC17.64■□□□□ 0.41
SCN4BQ8IWT1 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
SCN4BQ8IWT1 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SCN4BQ8IWT1 AC016027.1-202ENST00000607927 1699 ntBASIC17.64■□□□□ 0.41
SCN4BQ8IWT1 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC17.64■□□□□ 0.41
SCN4BQ8IWT1 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC17.64■□□□□ 0.41
SCN4BQ8IWT1 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC17.64■□□□□ 0.41
SCN4BQ8IWT1 AL671710.1-201ENST00000610245 2349 ntBASIC17.64■□□□□ 0.41
SCN4BQ8IWT1 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC17.64■□□□□ 0.41
SCN4BQ8IWT1 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SCN4BQ8IWT1 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SCN4BQ8IWT1 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SCN4BQ8IWT1 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SCN4BQ8IWT1 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
SCN4BQ8IWT1 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
SCN4BQ8IWT1 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
SCN4BQ8IWT1 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
SCN4BQ8IWT1 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
SCN4BQ8IWT1 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
SCN4BQ8IWT1 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
SCN4BQ8IWT1 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
SCN4BQ8IWT1 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC17.63■□□□□ 0.41
SCN4BQ8IWT1 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC17.63■□□□□ 0.41
SCN4BQ8IWT1 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SCN4BQ8IWT1 AL139400.1-201ENST00000366220 510 ntBASIC17.63■□□□□ 0.41
SCN4BQ8IWT1 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC17.63■□□□□ 0.41
SCN4BQ8IWT1 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
SCN4BQ8IWT1 AC023141.5-201ENST00000458585 616 ntBASIC17.63■□□□□ 0.41
SCN4BQ8IWT1 IGHV3-62-201ENST00000520057 340 ntBASIC17.63■□□□□ 0.41
SCN4BQ8IWT1 DAD1-205ENST00000543337 501 ntTSL 3 BASIC17.63■□□□□ 0.41
SCN4BQ8IWT1 AC093520.2-201ENST00000561830 333 ntBASIC17.63■□□□□ 0.41
SCN4BQ8IWT1 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC17.63■□□□□ 0.41
SCN4BQ8IWT1 AC093028.1-201ENST00000622998 982 ntBASIC17.63■□□□□ 0.41
SCN4BQ8IWT1 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC17.63■□□□□ 0.41
SCN4BQ8IWT1 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
SCN4BQ8IWT1 BSG-215ENST00000618006 1329 ntTSL 2 BASIC17.63■□□□□ 0.41
SCN4BQ8IWT1 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC17.63■□□□□ 0.41
SCN4BQ8IWT1 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC17.63■□□□□ 0.41
SCN4BQ8IWT1 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
SCN4BQ8IWT1 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
SCN4BQ8IWT1 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
SCN4BQ8IWT1 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SCN4BQ8IWT1 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
SCN4BQ8IWT1 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
SCN4BQ8IWT1 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
SCN4BQ8IWT1 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC17.62■□□□□ 0.41
SCN4BQ8IWT1 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
SCN4BQ8IWT1 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 52.3 ms