Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CCDC50Q8IVM0 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CCDC50Q8IVM0 TLE1-202ENST00000376484 666 ntTSL 3 BASIC17.78■□□□□ 0.44
CCDC50Q8IVM0 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC17.78■□□□□ 0.44
CCDC50Q8IVM0 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC17.78■□□□□ 0.44
CCDC50Q8IVM0 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC17.78■□□□□ 0.44
CCDC50Q8IVM0 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC17.78■□□□□ 0.44
CCDC50Q8IVM0 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC17.78■□□□□ 0.44
CCDC50Q8IVM0 ATP5G2P1-201ENST00000433580 426 ntBASIC17.78■□□□□ 0.44
CCDC50Q8IVM0 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CCDC50Q8IVM0 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC17.78■□□□□ 0.44
CCDC50Q8IVM0 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC17.78■□□□□ 0.44
CCDC50Q8IVM0 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC17.78■□□□□ 0.44
CCDC50Q8IVM0 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CCDC50Q8IVM0 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC17.78■□□□□ 0.44
CCDC50Q8IVM0 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC17.78■□□□□ 0.44
CCDC50Q8IVM0 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CCDC50Q8IVM0 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CCDC50Q8IVM0 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC17.78■□□□□ 0.44
CCDC50Q8IVM0 AC079776.2-201ENST00000641154 1609 ntBASIC17.78■□□□□ 0.44
CCDC50Q8IVM0 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC17.78■□□□□ 0.44
CCDC50Q8IVM0 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
CCDC50Q8IVM0 TSPY26P-202ENST00000565928 3884 ntBASIC17.78■□□□□ 0.44
CCDC50Q8IVM0 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CCDC50Q8IVM0 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CCDC50Q8IVM0 BANP-204ENST00000393208 2283 ntTSL 2 BASIC17.78■□□□□ 0.44
CCDC50Q8IVM0 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC17.78■□□□□ 0.44
CCDC50Q8IVM0 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
CCDC50Q8IVM0 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC17.78■□□□□ 0.44
CCDC50Q8IVM0 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CCDC50Q8IVM0 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC17.78■□□□□ 0.44
CCDC50Q8IVM0 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC17.78■□□□□ 0.44
CCDC50Q8IVM0 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
CCDC50Q8IVM0 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CCDC50Q8IVM0 AL391256.1-201ENST00000443260 1855 ntBASIC17.78■□□□□ 0.44
CCDC50Q8IVM0 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC17.77■□□□□ 0.44
CCDC50Q8IVM0 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CCDC50Q8IVM0 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CCDC50Q8IVM0 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC17.77■□□□□ 0.44
CCDC50Q8IVM0 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CCDC50Q8IVM0 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CCDC50Q8IVM0 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CCDC50Q8IVM0 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CCDC50Q8IVM0 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC17.77■□□□□ 0.44
CCDC50Q8IVM0 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CCDC50Q8IVM0 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CCDC50Q8IVM0 FUK-207ENST00000571514 3054 ntTSL 2 BASIC17.77■□□□□ 0.44
CCDC50Q8IVM0 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CCDC50Q8IVM0 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
CCDC50Q8IVM0 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CCDC50Q8IVM0 MED16-201ENST00000269814 1199 ntTSL 5 BASIC17.77■□□□□ 0.44
CCDC50Q8IVM0 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.44
CCDC50Q8IVM0 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CCDC50Q8IVM0 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
CCDC50Q8IVM0 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CCDC50Q8IVM0 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC17.77■□□□□ 0.44
CCDC50Q8IVM0 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC17.77■□□□□ 0.44
CCDC50Q8IVM0 CYB561-217ENST00000582997 877 ntTSL 5 BASIC17.77■□□□□ 0.44
CCDC50Q8IVM0 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC17.77■□□□□ 0.44
CCDC50Q8IVM0 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CCDC50Q8IVM0 AL445228.2-201ENST00000605589 952 ntBASIC17.77■□□□□ 0.44
CCDC50Q8IVM0 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC17.77■□□□□ 0.44
CCDC50Q8IVM0 HLA-A-202ENST00000376806 1854 ntBASIC17.77■□□□□ 0.43
CCDC50Q8IVM0 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
CCDC50Q8IVM0 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC17.77■□□□□ 0.43
CCDC50Q8IVM0 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC17.77■□□□□ 0.43
CCDC50Q8IVM0 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC17.77■□□□□ 0.43
CCDC50Q8IVM0 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
CCDC50Q8IVM0 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.43
CCDC50Q8IVM0 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
CCDC50Q8IVM0 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC17.76■□□□□ 0.43
CCDC50Q8IVM0 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CCDC50Q8IVM0 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC17.76■□□□□ 0.43
CCDC50Q8IVM0 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CCDC50Q8IVM0 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CCDC50Q8IVM0 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CCDC50Q8IVM0 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CCDC50Q8IVM0 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CCDC50Q8IVM0 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
CCDC50Q8IVM0 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CCDC50Q8IVM0 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CCDC50Q8IVM0 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CCDC50Q8IVM0 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CCDC50Q8IVM0 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CCDC50Q8IVM0 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC17.76■□□□□ 0.43
CCDC50Q8IVM0 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CCDC50Q8IVM0 RNF146-204ENST00000476956 884 ntTSL 2 BASIC17.76■□□□□ 0.43
CCDC50Q8IVM0 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC17.76■□□□□ 0.43
CCDC50Q8IVM0 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
CCDC50Q8IVM0 FICD-205ENST00000552758 603 ntTSL 2 BASIC17.76■□□□□ 0.43
CCDC50Q8IVM0 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC17.76■□□□□ 0.43
CCDC50Q8IVM0 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
CCDC50Q8IVM0 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC17.76■□□□□ 0.43
CCDC50Q8IVM0 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CCDC50Q8IVM0 HNRNPRP1-201ENST00000453465 1695 ntBASIC17.76■□□□□ 0.43
CCDC50Q8IVM0 AL021920.2-201ENST00000624828 1351 ntBASIC17.76■□□□□ 0.43
CCDC50Q8IVM0 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
CCDC50Q8IVM0 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CCDC50Q8IVM0 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC17.76■□□□□ 0.43
CCDC50Q8IVM0 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC17.76■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms