Protein–RNA interactions for Protein: Q8IVE0

CROCCP3, Putative ciliary rootlet coiled-coil protein-like 2 protein, humanhuman

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3Q8IVE0 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
CROCCP3Q8IVE0 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CROCCP3Q8IVE0 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CROCCP3Q8IVE0 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC15.26■□□□□ 0.03
CROCCP3Q8IVE0 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CROCCP3Q8IVE0 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CROCCP3Q8IVE0 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
CROCCP3Q8IVE0 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
CROCCP3Q8IVE0 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CROCCP3Q8IVE0 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CROCCP3Q8IVE0 KRT8P47-201ENST00000604727 1398 ntBASIC15.25■□□□□ 0.03
CROCCP3Q8IVE0 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC15.25■□□□□ 0.03
CROCCP3Q8IVE0 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CROCCP3Q8IVE0 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC15.25■□□□□ 0.03
CROCCP3Q8IVE0 GSN-203ENST00000373808 2664 ntTSL 2 BASIC15.25■□□□□ 0.03
CROCCP3Q8IVE0 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
CROCCP3Q8IVE0 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CROCCP3Q8IVE0 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CROCCP3Q8IVE0 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CROCCP3Q8IVE0 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC15.25■□□□□ 0.03
CROCCP3Q8IVE0 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CROCCP3Q8IVE0 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CROCCP3Q8IVE0 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC15.25■□□□□ 0.03
CROCCP3Q8IVE0 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CROCCP3Q8IVE0 SLC25A1P3-201ENST00000395415 828 ntBASIC15.25■□□□□ 0.03
CROCCP3Q8IVE0 GLI3-203ENST00000437480 451 ntTSL 2 BASIC15.25■□□□□ 0.03
CROCCP3Q8IVE0 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
CROCCP3Q8IVE0 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC15.25■□□□□ 0.03
CROCCP3Q8IVE0 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
CROCCP3Q8IVE0 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CROCCP3Q8IVE0 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC15.25■□□□□ 0.03
CROCCP3Q8IVE0 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CROCCP3Q8IVE0 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CROCCP3Q8IVE0 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CROCCP3Q8IVE0 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
CROCCP3Q8IVE0 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CROCCP3Q8IVE0 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC15.25■□□□□ 0.03
CROCCP3Q8IVE0 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
CROCCP3Q8IVE0 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CROCCP3Q8IVE0 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CROCCP3Q8IVE0 LCK-206ENST00000373564 2137 ntTSL 5 BASIC15.25■□□□□ 0.03
CROCCP3Q8IVE0 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CROCCP3Q8IVE0 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
CROCCP3Q8IVE0 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CROCCP3Q8IVE0 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CROCCP3Q8IVE0 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC15.24■□□□□ 0.03
CROCCP3Q8IVE0 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CROCCP3Q8IVE0 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
CROCCP3Q8IVE0 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CROCCP3Q8IVE0 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC15.24■□□□□ 0.03
CROCCP3Q8IVE0 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CROCCP3Q8IVE0 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CROCCP3Q8IVE0 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC15.24■□□□□ 0.03
CROCCP3Q8IVE0 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CROCCP3Q8IVE0 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC15.24■□□□□ 0.03
CROCCP3Q8IVE0 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
CROCCP3Q8IVE0 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CROCCP3Q8IVE0 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CROCCP3Q8IVE0 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC15.24■□□□□ 0.03
CROCCP3Q8IVE0 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CROCCP3Q8IVE0 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CROCCP3Q8IVE0 PARL-206ENST00000435888 1098 ntTSL 5 BASIC15.24■□□□□ 0.03
CROCCP3Q8IVE0 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC15.24■□□□□ 0.03
CROCCP3Q8IVE0 AC116562.2-201ENST00000507042 360 ntBASIC15.24■□□□□ 0.03
CROCCP3Q8IVE0 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC15.24■□□□□ 0.03
CROCCP3Q8IVE0 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC15.24■□□□□ 0.03
CROCCP3Q8IVE0 GRAMD4P8-201ENST00000605465 1115 ntBASIC15.24■□□□□ 0.03
CROCCP3Q8IVE0 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC15.24■□□□□ 0.03
CROCCP3Q8IVE0 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
CROCCP3Q8IVE0 AL161772.1-201ENST00000610494 4412 ntBASIC15.24■□□□□ 0.03
CROCCP3Q8IVE0 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
CROCCP3Q8IVE0 ADAM15-203ENST00000356955 2949 ntAPPRIS P4 TSL 1 (best) BASIC15.24■□□□□ 0.03
CROCCP3Q8IVE0 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
CROCCP3Q8IVE0 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CROCCP3Q8IVE0 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
CROCCP3Q8IVE0 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CROCCP3Q8IVE0 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CROCCP3Q8IVE0 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CROCCP3Q8IVE0 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
CROCCP3Q8IVE0 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CROCCP3Q8IVE0 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CROCCP3Q8IVE0 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
CROCCP3Q8IVE0 PGR-210ENST00000619228 3038 ntTSL 5 BASIC15.24■□□□□ 0.03
CROCCP3Q8IVE0 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CROCCP3Q8IVE0 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CROCCP3Q8IVE0 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC15.24■□□□□ 0.03
CROCCP3Q8IVE0 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
CROCCP3Q8IVE0 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC15.24■□□□□ 0.03
CROCCP3Q8IVE0 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CROCCP3Q8IVE0 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
CROCCP3Q8IVE0 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
CROCCP3Q8IVE0 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CROCCP3Q8IVE0 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC15.23■□□□□ 0.03
CROCCP3Q8IVE0 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CROCCP3Q8IVE0 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC15.23■□□□□ 0.03
CROCCP3Q8IVE0 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CROCCP3Q8IVE0 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
CROCCP3Q8IVE0 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CROCCP3Q8IVE0 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC15.23■□□□□ 0.03
CROCCP3Q8IVE0 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 11.3 ms