Protein–RNA interactions for Protein: Q8IVD9

NUDCD3, NudC domain-containing protein 3, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3Q8IVD9 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC16.72■□□□□ 0.27
NUDCD3Q8IVD9 AC133561.5-201ENST00000635547 218 ntBASIC16.72■□□□□ 0.27
NUDCD3Q8IVD9 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
NUDCD3Q8IVD9 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
NUDCD3Q8IVD9 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC16.72■□□□□ 0.27
NUDCD3Q8IVD9 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
NUDCD3Q8IVD9 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC16.72■□□□□ 0.27
NUDCD3Q8IVD9 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC16.72■□□□□ 0.27
NUDCD3Q8IVD9 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
NUDCD3Q8IVD9 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC16.72■□□□□ 0.27
NUDCD3Q8IVD9 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
NUDCD3Q8IVD9 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
NUDCD3Q8IVD9 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
NUDCD3Q8IVD9 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
NUDCD3Q8IVD9 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
NUDCD3Q8IVD9 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
NUDCD3Q8IVD9 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
NUDCD3Q8IVD9 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC16.72■□□□□ 0.27
NUDCD3Q8IVD9 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
NUDCD3Q8IVD9 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
NUDCD3Q8IVD9 AL596087.1-201ENST00000400979 1969 ntBASIC16.71■□□□□ 0.27
NUDCD3Q8IVD9 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
NUDCD3Q8IVD9 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
NUDCD3Q8IVD9 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC16.71■□□□□ 0.27
NUDCD3Q8IVD9 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
NUDCD3Q8IVD9 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC16.71■□□□□ 0.27
NUDCD3Q8IVD9 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
NUDCD3Q8IVD9 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
NUDCD3Q8IVD9 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
NUDCD3Q8IVD9 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
NUDCD3Q8IVD9 MBP-202ENST00000355994 2772 ntTSL 5 BASIC16.71■□□□□ 0.27
NUDCD3Q8IVD9 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
NUDCD3Q8IVD9 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
NUDCD3Q8IVD9 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
NUDCD3Q8IVD9 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
NUDCD3Q8IVD9 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
NUDCD3Q8IVD9 SIGLEC30P-201ENST00000455569 941 ntBASIC16.71■□□□□ 0.27
NUDCD3Q8IVD9 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
NUDCD3Q8IVD9 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
NUDCD3Q8IVD9 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC16.71■□□□□ 0.27
NUDCD3Q8IVD9 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
NUDCD3Q8IVD9 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC16.71■□□□□ 0.27
NUDCD3Q8IVD9 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
NUDCD3Q8IVD9 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
NUDCD3Q8IVD9 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
NUDCD3Q8IVD9 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
NUDCD3Q8IVD9 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
NUDCD3Q8IVD9 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
NUDCD3Q8IVD9 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
NUDCD3Q8IVD9 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.26
NUDCD3Q8IVD9 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC16.71■□□□□ 0.26
NUDCD3Q8IVD9 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.26
NUDCD3Q8IVD9 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
NUDCD3Q8IVD9 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
NUDCD3Q8IVD9 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC16.7■□□□□ 0.26
NUDCD3Q8IVD9 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC16.7■□□□□ 0.26
NUDCD3Q8IVD9 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
NUDCD3Q8IVD9 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
NUDCD3Q8IVD9 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
NUDCD3Q8IVD9 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC16.7■□□□□ 0.26
NUDCD3Q8IVD9 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
NUDCD3Q8IVD9 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
NUDCD3Q8IVD9 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
NUDCD3Q8IVD9 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
NUDCD3Q8IVD9 NUS1P1-201ENST00000446295 882 ntBASIC16.7■□□□□ 0.26
NUDCD3Q8IVD9 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC16.7■□□□□ 0.26
NUDCD3Q8IVD9 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC16.7■□□□□ 0.26
NUDCD3Q8IVD9 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC16.7■□□□□ 0.26
NUDCD3Q8IVD9 AC006011.2-201ENST00000621313 1158 ntBASIC16.7■□□□□ 0.26
NUDCD3Q8IVD9 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
NUDCD3Q8IVD9 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
NUDCD3Q8IVD9 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
NUDCD3Q8IVD9 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
NUDCD3Q8IVD9 AC068587.6-202ENST00000641839 5619 ntBASIC16.7■□□□□ 0.26
NUDCD3Q8IVD9 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
NUDCD3Q8IVD9 KRT8P49-201ENST00000604166 1432 ntBASIC16.7■□□□□ 0.26
NUDCD3Q8IVD9 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
NUDCD3Q8IVD9 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
NUDCD3Q8IVD9 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
NUDCD3Q8IVD9 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
NUDCD3Q8IVD9 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
NUDCD3Q8IVD9 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
NUDCD3Q8IVD9 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC16.69■□□□□ 0.26
NUDCD3Q8IVD9 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
NUDCD3Q8IVD9 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC16.69■□□□□ 0.26
NUDCD3Q8IVD9 HNRNPRP1-201ENST00000453465 1695 ntBASIC16.69■□□□□ 0.26
NUDCD3Q8IVD9 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC16.69■□□□□ 0.26
NUDCD3Q8IVD9 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
NUDCD3Q8IVD9 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC16.69■□□□□ 0.26
NUDCD3Q8IVD9 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
NUDCD3Q8IVD9 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC16.69■□□□□ 0.26
NUDCD3Q8IVD9 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
NUDCD3Q8IVD9 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
NUDCD3Q8IVD9 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
NUDCD3Q8IVD9 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC16.69■□□□□ 0.26
NUDCD3Q8IVD9 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
NUDCD3Q8IVD9 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
NUDCD3Q8IVD9 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC16.69■□□□□ 0.26
NUDCD3Q8IVD9 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
NUDCD3Q8IVD9 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC16.69■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms