Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC17.82■□□□□ 0.44
NPAS4Q8IUM7 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
NPAS4Q8IUM7 AL080243.2-201ENST00000418783 582 ntBASIC17.82■□□□□ 0.44
NPAS4Q8IUM7 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC17.82■□□□□ 0.44
NPAS4Q8IUM7 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC17.82■□□□□ 0.44
NPAS4Q8IUM7 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
NPAS4Q8IUM7 AL079307.3-201ENST00000556114 283 ntBASIC17.82■□□□□ 0.44
NPAS4Q8IUM7 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC17.82■□□□□ 0.44
NPAS4Q8IUM7 AL132655.2-201ENST00000596276 594 ntBASIC17.82■□□□□ 0.44
NPAS4Q8IUM7 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC17.82■□□□□ 0.44
NPAS4Q8IUM7 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC17.82■□□□□ 0.44
NPAS4Q8IUM7 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC17.82■□□□□ 0.44
NPAS4Q8IUM7 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
NPAS4Q8IUM7 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
NPAS4Q8IUM7 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
NPAS4Q8IUM7 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
NPAS4Q8IUM7 SNX33P1-201ENST00000592116 1762 ntBASIC17.81■□□□□ 0.44
NPAS4Q8IUM7 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
NPAS4Q8IUM7 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
NPAS4Q8IUM7 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC17.81■□□□□ 0.44
NPAS4Q8IUM7 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
NPAS4Q8IUM7 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
NPAS4Q8IUM7 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
NPAS4Q8IUM7 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
NPAS4Q8IUM7 RPS19-201ENST00000221975 500 ntTSL 3 BASIC17.81■□□□□ 0.44
NPAS4Q8IUM7 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
NPAS4Q8IUM7 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
NPAS4Q8IUM7 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
NPAS4Q8IUM7 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC17.81■□□□□ 0.44
NPAS4Q8IUM7 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC17.81■□□□□ 0.44
NPAS4Q8IUM7 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC17.81■□□□□ 0.44
NPAS4Q8IUM7 KRT17P7-201ENST00000451704 1104 ntBASIC17.81■□□□□ 0.44
NPAS4Q8IUM7 MEIS3P1-201ENST00000495167 958 ntBASIC17.81■□□□□ 0.44
NPAS4Q8IUM7 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC17.81■□□□□ 0.44
NPAS4Q8IUM7 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC17.81■□□□□ 0.44
NPAS4Q8IUM7 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
NPAS4Q8IUM7 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC17.81■□□□□ 0.44
NPAS4Q8IUM7 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC17.81■□□□□ 0.44
NPAS4Q8IUM7 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
NPAS4Q8IUM7 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
NPAS4Q8IUM7 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
NPAS4Q8IUM7 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
NPAS4Q8IUM7 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
NPAS4Q8IUM7 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
NPAS4Q8IUM7 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
NPAS4Q8IUM7 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
NPAS4Q8IUM7 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
NPAS4Q8IUM7 AC007541.1-201ENST00000570282 1469 ntBASIC17.81■□□□□ 0.44
NPAS4Q8IUM7 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
NPAS4Q8IUM7 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC17.81■□□□□ 0.44
NPAS4Q8IUM7 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
NPAS4Q8IUM7 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC17.8■□□□□ 0.44
NPAS4Q8IUM7 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
NPAS4Q8IUM7 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
NPAS4Q8IUM7 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
NPAS4Q8IUM7 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
NPAS4Q8IUM7 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
NPAS4Q8IUM7 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
NPAS4Q8IUM7 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC17.8■□□□□ 0.44
NPAS4Q8IUM7 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
NPAS4Q8IUM7 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
NPAS4Q8IUM7 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
NPAS4Q8IUM7 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
NPAS4Q8IUM7 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
NPAS4Q8IUM7 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
NPAS4Q8IUM7 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
NPAS4Q8IUM7 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
NPAS4Q8IUM7 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
NPAS4Q8IUM7 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
NPAS4Q8IUM7 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
NPAS4Q8IUM7 AL353779.1-201ENST00000434793 351 ntBASIC17.8■□□□□ 0.44
NPAS4Q8IUM7 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC17.8■□□□□ 0.44
NPAS4Q8IUM7 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC17.8■□□□□ 0.44
NPAS4Q8IUM7 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC17.8■□□□□ 0.44
NPAS4Q8IUM7 ZNF890P-202ENST00000530367 1156 ntBASIC17.8■□□□□ 0.44
NPAS4Q8IUM7 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC17.8■□□□□ 0.44
NPAS4Q8IUM7 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC17.8■□□□□ 0.44
NPAS4Q8IUM7 RNA5-8SN1-201ENST00000610460 153 ntBASIC17.8■□□□□ 0.44
NPAS4Q8IUM7 RNA5-8SN5-202ENST00000612463 153 ntBASIC17.8■□□□□ 0.44
NPAS4Q8IUM7 RNA5-8SN4-201ENST00000613359 153 ntBASIC17.8■□□□□ 0.44
NPAS4Q8IUM7 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC17.8■□□□□ 0.44
NPAS4Q8IUM7 RNA5-8SN5-201ENST00000619471 153 ntBASIC17.8■□□□□ 0.44
NPAS4Q8IUM7 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
NPAS4Q8IUM7 AC004840.1-201ENST00000636359 365 ntBASIC17.8■□□□□ 0.44
NPAS4Q8IUM7 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
NPAS4Q8IUM7 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
NPAS4Q8IUM7 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
NPAS4Q8IUM7 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
NPAS4Q8IUM7 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
NPAS4Q8IUM7 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC17.8■□□□□ 0.44
NPAS4Q8IUM7 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
NPAS4Q8IUM7 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
NPAS4Q8IUM7 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
NPAS4Q8IUM7 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC17.79■□□□□ 0.44
NPAS4Q8IUM7 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
NPAS4Q8IUM7 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
NPAS4Q8IUM7 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
NPAS4Q8IUM7 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
NPAS4Q8IUM7 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC17.79■□□□□ 0.44
NPAS4Q8IUM7 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 46 ms