Protein–RNA interactions for Protein: Q7LBR1

CHMP1B, Charged multivesicular body protein 1b, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1BQ7LBR1 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
CHMP1BQ7LBR1 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CHMP1BQ7LBR1 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CHMP1BQ7LBR1 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CHMP1BQ7LBR1 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CHMP1BQ7LBR1 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
CHMP1BQ7LBR1 BANP-227ENST00000626016 2144 ntTSL 2 BASIC15.56■□□□□ 0.08
CHMP1BQ7LBR1 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CHMP1BQ7LBR1 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
CHMP1BQ7LBR1 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC15.56■□□□□ 0.08
CHMP1BQ7LBR1 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC15.56■□□□□ 0.08
CHMP1BQ7LBR1 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
CHMP1BQ7LBR1 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC15.56■□□□□ 0.08
CHMP1BQ7LBR1 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CHMP1BQ7LBR1 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CHMP1BQ7LBR1 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CHMP1BQ7LBR1 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CHMP1BQ7LBR1 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CHMP1BQ7LBR1 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CHMP1BQ7LBR1 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CHMP1BQ7LBR1 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CHMP1BQ7LBR1 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC15.56■□□□□ 0.08
CHMP1BQ7LBR1 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CHMP1BQ7LBR1 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC15.56■□□□□ 0.08
CHMP1BQ7LBR1 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
CHMP1BQ7LBR1 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CHMP1BQ7LBR1 AC012640.2-201ENST00000561606 901 ntBASIC15.56■□□□□ 0.08
CHMP1BQ7LBR1 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC15.56■□□□□ 0.08
CHMP1BQ7LBR1 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC15.56■□□□□ 0.08
CHMP1BQ7LBR1 AC004706.3-202ENST00000621574 984 ntBASIC15.56■□□□□ 0.08
CHMP1BQ7LBR1 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
CHMP1BQ7LBR1 AP002414.3-201ENST00000589352 1468 ntBASIC15.56■□□□□ 0.08
CHMP1BQ7LBR1 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CHMP1BQ7LBR1 AL023806.1-201ENST00000603994 1649 ntBASIC15.56■□□□□ 0.08
CHMP1BQ7LBR1 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC15.56■□□□□ 0.08
CHMP1BQ7LBR1 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
CHMP1BQ7LBR1 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CHMP1BQ7LBR1 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
CHMP1BQ7LBR1 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
CHMP1BQ7LBR1 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
CHMP1BQ7LBR1 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
CHMP1BQ7LBR1 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CHMP1BQ7LBR1 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CHMP1BQ7LBR1 TSPY26P-202ENST00000565928 3884 ntBASIC15.55■□□□□ 0.08
CHMP1BQ7LBR1 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC15.55■□□□□ 0.08
CHMP1BQ7LBR1 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
CHMP1BQ7LBR1 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CHMP1BQ7LBR1 DENND4C-209ENST00000602925 6831 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
CHMP1BQ7LBR1 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC15.55■□□□□ 0.08
CHMP1BQ7LBR1 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CHMP1BQ7LBR1 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
CHMP1BQ7LBR1 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CHMP1BQ7LBR1 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
CHMP1BQ7LBR1 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC15.55■□□□□ 0.08
CHMP1BQ7LBR1 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CHMP1BQ7LBR1 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC15.55■□□□□ 0.08
CHMP1BQ7LBR1 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CHMP1BQ7LBR1 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CHMP1BQ7LBR1 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC15.55■□□□□ 0.08
CHMP1BQ7LBR1 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC15.55■□□□□ 0.08
CHMP1BQ7LBR1 AC104109.2-201ENST00000602919 1418 ntBASIC15.55■□□□□ 0.08
CHMP1BQ7LBR1 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CHMP1BQ7LBR1 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
CHMP1BQ7LBR1 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CHMP1BQ7LBR1 CSF3-203ENST00000394148 622 ntTSL 3 BASIC15.55■□□□□ 0.08
CHMP1BQ7LBR1 PMS2P1-201ENST00000431037 1228 ntBASIC15.55■□□□□ 0.08
CHMP1BQ7LBR1 ARTN-206ENST00000472435 402 ntTSL 3 BASIC15.55■□□□□ 0.08
CHMP1BQ7LBR1 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC15.55■□□□□ 0.08
CHMP1BQ7LBR1 KRT18P58-201ENST00000527480 1120 ntBASIC15.55■□□□□ 0.08
CHMP1BQ7LBR1 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC15.55■□□□□ 0.08
CHMP1BQ7LBR1 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC15.55■□□□□ 0.08
CHMP1BQ7LBR1 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC15.55■□□□□ 0.08
CHMP1BQ7LBR1 AC106730.1-201ENST00000566722 1090 ntBASIC15.55■□□□□ 0.08
CHMP1BQ7LBR1 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CHMP1BQ7LBR1 AL139424.1-201ENST00000607572 797 ntBASIC15.55■□□□□ 0.08
CHMP1BQ7LBR1 NME4-212ENST00000621774 904 ntTSL 3 BASIC15.55■□□□□ 0.08
CHMP1BQ7LBR1 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC15.55■□□□□ 0.08
CHMP1BQ7LBR1 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CHMP1BQ7LBR1 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC15.55■□□□□ 0.08
CHMP1BQ7LBR1 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CHMP1BQ7LBR1 LINC00554-201ENST00000564841 3011 ntBASIC15.55■□□□□ 0.08
CHMP1BQ7LBR1 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CHMP1BQ7LBR1 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
CHMP1BQ7LBR1 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CHMP1BQ7LBR1 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC15.55■□□□□ 0.08
CHMP1BQ7LBR1 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC15.55■□□□□ 0.08
CHMP1BQ7LBR1 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CHMP1BQ7LBR1 AL355312.1-201ENST00000407115 2176 ntBASIC15.55■□□□□ 0.08
CHMP1BQ7LBR1 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CHMP1BQ7LBR1 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CHMP1BQ7LBR1 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CHMP1BQ7LBR1 LINC00304-203ENST00000565008 1864 ntBASIC15.54■□□□□ 0.08
CHMP1BQ7LBR1 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC15.54■□□□□ 0.08
CHMP1BQ7LBR1 NORAD-201ENST00000565493 5339 ntBASIC15.54■□□□□ 0.08
CHMP1BQ7LBR1 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CHMP1BQ7LBR1 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CHMP1BQ7LBR1 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC15.54■□□□□ 0.08
CHMP1BQ7LBR1 AC133963.1-201ENST00000504166 1679 ntBASIC15.54■□□□□ 0.08
CHMP1BQ7LBR1 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CHMP1BQ7LBR1 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms