Protein–RNA interactions for Protein: Q5XG99

LYSMD4, LysM and putative peptidoglycan-binding domain-containing protein 4, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4Q5XG99 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
LYSMD4Q5XG99 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC16.32■□□□□ 0.2
LYSMD4Q5XG99 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
LYSMD4Q5XG99 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
LYSMD4Q5XG99 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC16.32■□□□□ 0.2
LYSMD4Q5XG99 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
LYSMD4Q5XG99 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
LYSMD4Q5XG99 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
LYSMD4Q5XG99 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
LYSMD4Q5XG99 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC16.31■□□□□ 0.2
LYSMD4Q5XG99 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
LYSMD4Q5XG99 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
LYSMD4Q5XG99 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC16.31■□□□□ 0.2
LYSMD4Q5XG99 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC16.31■□□□□ 0.2
LYSMD4Q5XG99 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
LYSMD4Q5XG99 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC16.31■□□□□ 0.2
LYSMD4Q5XG99 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC16.31■□□□□ 0.2
LYSMD4Q5XG99 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LYSMD4Q5XG99 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LYSMD4Q5XG99 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
LYSMD4Q5XG99 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LYSMD4Q5XG99 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
LYSMD4Q5XG99 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
LYSMD4Q5XG99 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
LYSMD4Q5XG99 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
LYSMD4Q5XG99 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC16.31■□□□□ 0.2
LYSMD4Q5XG99 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC16.31■□□□□ 0.2
LYSMD4Q5XG99 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
LYSMD4Q5XG99 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC16.31■□□□□ 0.2
LYSMD4Q5XG99 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC16.31■□□□□ 0.2
LYSMD4Q5XG99 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC16.31■□□□□ 0.2
LYSMD4Q5XG99 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC16.31■□□□□ 0.2
LYSMD4Q5XG99 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC16.31■□□□□ 0.2
LYSMD4Q5XG99 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
LYSMD4Q5XG99 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
LYSMD4Q5XG99 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
LYSMD4Q5XG99 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LYSMD4Q5XG99 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LYSMD4Q5XG99 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
LYSMD4Q5XG99 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC16.31■□□□□ 0.2
LYSMD4Q5XG99 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
LYSMD4Q5XG99 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
LYSMD4Q5XG99 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LYSMD4Q5XG99 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
LYSMD4Q5XG99 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LYSMD4Q5XG99 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC16.3■□□□□ 0.2
LYSMD4Q5XG99 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
LYSMD4Q5XG99 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
LYSMD4Q5XG99 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC16.3■□□□□ 0.2
LYSMD4Q5XG99 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
LYSMD4Q5XG99 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC16.3■□□□□ 0.2
LYSMD4Q5XG99 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC16.3■□□□□ 0.2
LYSMD4Q5XG99 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
LYSMD4Q5XG99 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LYSMD4Q5XG99 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
LYSMD4Q5XG99 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LYSMD4Q5XG99 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC16.3■□□□□ 0.2
LYSMD4Q5XG99 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC16.3■□□□□ 0.2
LYSMD4Q5XG99 DPM2-202ENST00000373110 738 ntTSL 2 BASIC16.3■□□□□ 0.2
LYSMD4Q5XG99 SERBP1P3-201ENST00000459980 809 ntBASIC16.3■□□□□ 0.2
LYSMD4Q5XG99 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC16.3■□□□□ 0.2
LYSMD4Q5XG99 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
LYSMD4Q5XG99 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC16.3■□□□□ 0.2
LYSMD4Q5XG99 AC008494.3-201ENST00000606615 944 ntBASIC16.3■□□□□ 0.2
LYSMD4Q5XG99 AL162274.1-201ENST00000617191 1098 ntBASIC16.3■□□□□ 0.2
LYSMD4Q5XG99 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC16.3■□□□□ 0.2
LYSMD4Q5XG99 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
LYSMD4Q5XG99 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
LYSMD4Q5XG99 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LYSMD4Q5XG99 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LYSMD4Q5XG99 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
LYSMD4Q5XG99 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
LYSMD4Q5XG99 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
LYSMD4Q5XG99 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LYSMD4Q5XG99 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
LYSMD4Q5XG99 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC16.29■□□□□ 0.2
LYSMD4Q5XG99 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC16.29■□□□□ 0.2
LYSMD4Q5XG99 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
LYSMD4Q5XG99 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC16.29■□□□□ 0.2
LYSMD4Q5XG99 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
LYSMD4Q5XG99 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
LYSMD4Q5XG99 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
LYSMD4Q5XG99 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
LYSMD4Q5XG99 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
LYSMD4Q5XG99 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC16.29■□□□□ 0.2
LYSMD4Q5XG99 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
LYSMD4Q5XG99 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
LYSMD4Q5XG99 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
LYSMD4Q5XG99 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC16.29■□□□□ 0.2
LYSMD4Q5XG99 RBM39-205ENST00000397370 612 ntTSL 2 BASIC16.29■□□□□ 0.2
LYSMD4Q5XG99 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC16.29■□□□□ 0.2
LYSMD4Q5XG99 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC16.29■□□□□ 0.2
LYSMD4Q5XG99 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC16.29■□□□□ 0.2
LYSMD4Q5XG99 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
LYSMD4Q5XG99 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC16.29■□□□□ 0.2
LYSMD4Q5XG99 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC16.29■□□□□ 0.2
LYSMD4Q5XG99 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC16.29■□□□□ 0.2
LYSMD4Q5XG99 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC16.29■□□□□ 0.2
LYSMD4Q5XG99 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC16.29■□□□□ 0.2
LYSMD4Q5XG99 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 66.5 ms