Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
CDC42BPAQ5VT25 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC24.94■■□□□ 1.58
CDC42BPAQ5VT25 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC24.94■■□□□ 1.58
CDC42BPAQ5VT25 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
CDC42BPAQ5VT25 AMT-206ENST00000458307 1860 ntTSL 2 BASIC24.93■■□□□ 1.58
CDC42BPAQ5VT25 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC24.93■■□□□ 1.58
CDC42BPAQ5VT25 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC24.93■■□□□ 1.58
CDC42BPAQ5VT25 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC24.93■■□□□ 1.58
CDC42BPAQ5VT25 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC24.93■■□□□ 1.58
CDC42BPAQ5VT25 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC24.93■■□□□ 1.58
CDC42BPAQ5VT25 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC24.93■■□□□ 1.58
CDC42BPAQ5VT25 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC24.93■■□□□ 1.58
CDC42BPAQ5VT25 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
CDC42BPAQ5VT25 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC24.93■■□□□ 1.58
CDC42BPAQ5VT25 RPS2P32-201ENST00000439199 892 ntBASIC24.93■■□□□ 1.58
CDC42BPAQ5VT25 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
CDC42BPAQ5VT25 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
CDC42BPAQ5VT25 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC24.93■■□□□ 1.58
CDC42BPAQ5VT25 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC24.93■■□□□ 1.58
CDC42BPAQ5VT25 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC24.93■■□□□ 1.58
CDC42BPAQ5VT25 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC24.93■■□□□ 1.58
CDC42BPAQ5VT25 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC24.93■■□□□ 1.58
CDC42BPAQ5VT25 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
CDC42BPAQ5VT25 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC24.93■■□□□ 1.58
CDC42BPAQ5VT25 AC087499.6-201ENST00000411576 835 ntBASIC24.92■■□□□ 1.58
CDC42BPAQ5VT25 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC24.92■■□□□ 1.58
CDC42BPAQ5VT25 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC24.92■■□□□ 1.58
CDC42BPAQ5VT25 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC24.92■■□□□ 1.58
CDC42BPAQ5VT25 RRP7BP-205ENST00000566851 833 ntBASIC24.92■■□□□ 1.58
CDC42BPAQ5VT25 WFDC1-204ENST00000613603 549 ntBASIC24.92■■□□□ 1.58
CDC42BPAQ5VT25 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC24.92■■□□□ 1.58
CDC42BPAQ5VT25 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
CDC42BPAQ5VT25 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
CDC42BPAQ5VT25 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
CDC42BPAQ5VT25 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC24.92■■□□□ 1.58
CDC42BPAQ5VT25 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC24.92■■□□□ 1.58
CDC42BPAQ5VT25 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC24.92■■□□□ 1.58
CDC42BPAQ5VT25 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
CDC42BPAQ5VT25 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC24.92■■□□□ 1.58
CDC42BPAQ5VT25 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
CDC42BPAQ5VT25 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC24.92■■□□□ 1.58
CDC42BPAQ5VT25 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC24.92■■□□□ 1.58
CDC42BPAQ5VT25 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC24.92■■□□□ 1.58
CDC42BPAQ5VT25 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC24.92■■□□□ 1.58
CDC42BPAQ5VT25 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC24.92■■□□□ 1.58
CDC42BPAQ5VT25 ANKRD19P-201ENST00000338192 862 ntBASIC24.92■■□□□ 1.58
CDC42BPAQ5VT25 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC24.92■■□□□ 1.58
CDC42BPAQ5VT25 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC24.92■■□□□ 1.58
CDC42BPAQ5VT25 GALT-202ENST00000450095 1280 ntTSL 2 BASIC24.92■■□□□ 1.58
CDC42BPAQ5VT25 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
CDC42BPAQ5VT25 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC24.92■■□□□ 1.58
CDC42BPAQ5VT25 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
CDC42BPAQ5VT25 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC24.92■■□□□ 1.58
CDC42BPAQ5VT25 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC24.91■■□□□ 1.58
CDC42BPAQ5VT25 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
CDC42BPAQ5VT25 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC24.91■■□□□ 1.58
CDC42BPAQ5VT25 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
CDC42BPAQ5VT25 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC24.91■■□□□ 1.58
CDC42BPAQ5VT25 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC24.91■■□□□ 1.58
CDC42BPAQ5VT25 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
CDC42BPAQ5VT25 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC24.91■■□□□ 1.58
CDC42BPAQ5VT25 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
CDC42BPAQ5VT25 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC24.91■■□□□ 1.58
CDC42BPAQ5VT25 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC24.91■■□□□ 1.58
CDC42BPAQ5VT25 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC24.91■■□□□ 1.58
CDC42BPAQ5VT25 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
CDC42BPAQ5VT25 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC24.91■■□□□ 1.58
CDC42BPAQ5VT25 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
CDC42BPAQ5VT25 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC24.91■■□□□ 1.58
CDC42BPAQ5VT25 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC24.91■■□□□ 1.58
CDC42BPAQ5VT25 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
CDC42BPAQ5VT25 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
CDC42BPAQ5VT25 FUZ-207ENST00000526575 482 ntTSL 4 BASIC24.91■■□□□ 1.58
CDC42BPAQ5VT25 KRT17P8-201ENST00000540749 863 ntBASIC24.91■■□□□ 1.58
CDC42BPAQ5VT25 AC026979.3-201ENST00000607315 403 ntBASIC24.91■■□□□ 1.58
CDC42BPAQ5VT25 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC24.91■■□□□ 1.58
CDC42BPAQ5VT25 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
CDC42BPAQ5VT25 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC24.91■■□□□ 1.58
CDC42BPAQ5VT25 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC24.91■■□□□ 1.58
CDC42BPAQ5VT25 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC24.91■■□□□ 1.58
CDC42BPAQ5VT25 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC24.91■■□□□ 1.58
CDC42BPAQ5VT25 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC24.91■■□□□ 1.58
CDC42BPAQ5VT25 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
CDC42BPAQ5VT25 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC24.9■■□□□ 1.58
CDC42BPAQ5VT25 CYP4F24P-201ENST00000586049 1580 ntBASIC24.9■■□□□ 1.58
CDC42BPAQ5VT25 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC24.9■■□□□ 1.58
CDC42BPAQ5VT25 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
CDC42BPAQ5VT25 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC24.9■■□□□ 1.58
CDC42BPAQ5VT25 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC24.9■■□□□ 1.58
CDC42BPAQ5VT25 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC24.9■■□□□ 1.58
CDC42BPAQ5VT25 AC074044.1-201ENST00000609673 707 ntBASIC24.9■■□□□ 1.58
CDC42BPAQ5VT25 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
CDC42BPAQ5VT25 AL136982.4-201ENST00000437689 1740 ntBASIC24.9■■□□□ 1.58
CDC42BPAQ5VT25 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
CDC42BPAQ5VT25 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC24.9■■□□□ 1.58
CDC42BPAQ5VT25 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC24.9■■□□□ 1.58
CDC42BPAQ5VT25 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC24.9■■□□□ 1.58
CDC42BPAQ5VT25 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC24.9■■□□□ 1.58
CDC42BPAQ5VT25 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
CDC42BPAQ5VT25 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
Retrieved 100 of 98,524 protein–RNA pairs in 50.7 ms