Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC17.7■□□□□ 0.42
VARS2Q5ST30 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC17.7■□□□□ 0.42
VARS2Q5ST30 AC125807.1-201ENST00000483097 614 ntBASIC17.7■□□□□ 0.42
VARS2Q5ST30 AC105233.2-201ENST00000523697 349 ntBASIC17.7■□□□□ 0.42
VARS2Q5ST30 AF228730.5-201ENST00000530288 346 ntBASIC17.7■□□□□ 0.42
VARS2Q5ST30 RBM7-207ENST00000544582 692 ntTSL 3 BASIC17.7■□□□□ 0.42
VARS2Q5ST30 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC17.7■□□□□ 0.42
VARS2Q5ST30 INO80C-206ENST00000586489 594 ntTSL 3 BASIC17.7■□□□□ 0.42
VARS2Q5ST30 MIR6080-201ENST00000617359 66 ntBASIC17.7■□□□□ 0.42
VARS2Q5ST30 BANP-227ENST00000626016 2144 ntTSL 2 BASIC17.7■□□□□ 0.42
VARS2Q5ST30 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
VARS2Q5ST30 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
VARS2Q5ST30 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC17.7■□□□□ 0.42
VARS2Q5ST30 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC17.7■□□□□ 0.42
VARS2Q5ST30 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
VARS2Q5ST30 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
VARS2Q5ST30 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
VARS2Q5ST30 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
VARS2Q5ST30 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
VARS2Q5ST30 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC17.69■□□□□ 0.42
VARS2Q5ST30 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC17.69■□□□□ 0.42
VARS2Q5ST30 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
VARS2Q5ST30 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
VARS2Q5ST30 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
VARS2Q5ST30 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
VARS2Q5ST30 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
VARS2Q5ST30 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
VARS2Q5ST30 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
VARS2Q5ST30 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC17.69■□□□□ 0.42
VARS2Q5ST30 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
VARS2Q5ST30 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC17.69■□□□□ 0.42
VARS2Q5ST30 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
VARS2Q5ST30 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
VARS2Q5ST30 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC17.69■□□□□ 0.42
VARS2Q5ST30 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
VARS2Q5ST30 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
VARS2Q5ST30 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
VARS2Q5ST30 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC17.69■□□□□ 0.42
VARS2Q5ST30 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
VARS2Q5ST30 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC17.69■□□□□ 0.42
VARS2Q5ST30 WRB-204ENST00000398753 699 ntTSL 3 BASIC17.69■□□□□ 0.42
VARS2Q5ST30 MIR943-201ENST00000401286 94 ntBASIC17.69■□□□□ 0.42
VARS2Q5ST30 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC17.69■□□□□ 0.42
VARS2Q5ST30 AC107890.1-201ENST00000422478 521 ntBASIC17.69■□□□□ 0.42
VARS2Q5ST30 AC142381.1-201ENST00000426099 345 ntBASIC17.69■□□□□ 0.42
VARS2Q5ST30 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC17.69■□□□□ 0.42
VARS2Q5ST30 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC17.69■□□□□ 0.42
VARS2Q5ST30 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC17.69■□□□□ 0.42
VARS2Q5ST30 AF228730.6-201ENST00000641497 218 ntBASIC17.69■□□□□ 0.42
VARS2Q5ST30 AC084121.3-201ENST00000641716 218 ntBASIC17.69■□□□□ 0.42
VARS2Q5ST30 AC105233.6-201ENST00000642093 218 ntBASIC17.69■□□□□ 0.42
VARS2Q5ST30 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC17.69■□□□□ 0.42
VARS2Q5ST30 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
VARS2Q5ST30 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
VARS2Q5ST30 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
VARS2Q5ST30 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
VARS2Q5ST30 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
VARS2Q5ST30 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC17.69■□□□□ 0.42
VARS2Q5ST30 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
VARS2Q5ST30 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
VARS2Q5ST30 SNX33P1-201ENST00000592116 1762 ntBASIC17.68■□□□□ 0.42
VARS2Q5ST30 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC17.68■□□□□ 0.42
VARS2Q5ST30 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
VARS2Q5ST30 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
VARS2Q5ST30 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
VARS2Q5ST30 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
VARS2Q5ST30 OR2J1-201ENST00000377171 1273 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
VARS2Q5ST30 AC055876.3-201ENST00000431496 288 ntBASIC17.68■□□□□ 0.42
VARS2Q5ST30 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC17.68■□□□□ 0.42
VARS2Q5ST30 AC093214.1-201ENST00000511688 1107 ntBASIC17.68■□□□□ 0.42
VARS2Q5ST30 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC17.68■□□□□ 0.42
VARS2Q5ST30 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC17.68■□□□□ 0.42
VARS2Q5ST30 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC17.68■□□□□ 0.42
VARS2Q5ST30 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC17.68■□□□□ 0.42
VARS2Q5ST30 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC17.68■□□□□ 0.42
VARS2Q5ST30 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC17.68■□□□□ 0.42
VARS2Q5ST30 AC073389.1-201ENST00000595595 795 ntBASIC17.68■□□□□ 0.42
VARS2Q5ST30 AC138649.4-201ENST00000612222 287 ntBASIC17.68■□□□□ 0.42
VARS2Q5ST30 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC17.68■□□□□ 0.42
VARS2Q5ST30 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
VARS2Q5ST30 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC17.68■□□□□ 0.42
VARS2Q5ST30 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
VARS2Q5ST30 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC17.68■□□□□ 0.42
VARS2Q5ST30 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
VARS2Q5ST30 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
VARS2Q5ST30 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
VARS2Q5ST30 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
VARS2Q5ST30 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC17.67■□□□□ 0.42
VARS2Q5ST30 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC17.67■□□□□ 0.42
VARS2Q5ST30 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC17.67■□□□□ 0.42
VARS2Q5ST30 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
VARS2Q5ST30 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
VARS2Q5ST30 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
VARS2Q5ST30 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
VARS2Q5ST30 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC17.67■□□□□ 0.42
VARS2Q5ST30 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
VARS2Q5ST30 KRT8P39-201ENST00000396270 1433 ntBASIC17.67■□□□□ 0.42
VARS2Q5ST30 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
VARS2Q5ST30 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC17.67■□□□□ 0.42
VARS2Q5ST30 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms