Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
PCDH1Q08174 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
PCDH1Q08174 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
PCDH1Q08174 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
PCDH1Q08174 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
PCDH1Q08174 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PCDH1Q08174 PC-214ENST00000628663 1470 ntTSL 5 BASIC16.18■□□□□ 0.18
PCDH1Q08174 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC16.18■□□□□ 0.18
PCDH1Q08174 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC16.18■□□□□ 0.18
PCDH1Q08174 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PCDH1Q08174 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PCDH1Q08174 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PCDH1Q08174 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
PCDH1Q08174 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC16.18■□□□□ 0.18
PCDH1Q08174 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC16.18■□□□□ 0.18
PCDH1Q08174 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC16.18■□□□□ 0.18
PCDH1Q08174 AC108073.2-201ENST00000464002 357 ntBASIC16.18■□□□□ 0.18
PCDH1Q08174 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC16.18■□□□□ 0.18
PCDH1Q08174 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC16.18■□□□□ 0.18
PCDH1Q08174 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC16.18■□□□□ 0.18
PCDH1Q08174 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC16.18■□□□□ 0.18
PCDH1Q08174 AC087641.1-201ENST00000557561 1021 ntBASIC16.18■□□□□ 0.18
PCDH1Q08174 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC16.18■□□□□ 0.18
PCDH1Q08174 CYP2A7P1-201ENST00000595391 815 ntBASIC16.18■□□□□ 0.18
PCDH1Q08174 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
PCDH1Q08174 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC16.18■□□□□ 0.18
PCDH1Q08174 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
PCDH1Q08174 MIR7706-201ENST00000613747 67 ntBASIC16.18■□□□□ 0.18
PCDH1Q08174 AC010654.1-201ENST00000615722 808 ntBASIC16.18■□□□□ 0.18
PCDH1Q08174 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC16.18■□□□□ 0.18
PCDH1Q08174 AC117500.6-201ENST00000624871 588 ntBASIC16.18■□□□□ 0.18
PCDH1Q08174 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC16.18■□□□□ 0.18
PCDH1Q08174 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC16.18■□□□□ 0.18
PCDH1Q08174 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PCDH1Q08174 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC16.18■□□□□ 0.18
PCDH1Q08174 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PCDH1Q08174 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PCDH1Q08174 ME2P1-201ENST00000426028 1970 ntBASIC16.18■□□□□ 0.18
PCDH1Q08174 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PCDH1Q08174 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PCDH1Q08174 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
PCDH1Q08174 CA12-203ENST00000422263 2556 ntTSL 2 BASIC16.18■□□□□ 0.18
PCDH1Q08174 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC16.18■□□□□ 0.18
PCDH1Q08174 AC046158.3-201ENST00000624947 2558 ntBASIC16.18■□□□□ 0.18
PCDH1Q08174 GGT3P-204ENST00000453783 1664 ntBASIC16.18■□□□□ 0.18
PCDH1Q08174 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC16.18■□□□□ 0.18
PCDH1Q08174 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PCDH1Q08174 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
PCDH1Q08174 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
PCDH1Q08174 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC16.17■□□□□ 0.18
PCDH1Q08174 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
PCDH1Q08174 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
PCDH1Q08174 AC092171.3-201ENST00000610122 2651 ntBASIC16.17■□□□□ 0.18
PCDH1Q08174 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC16.17■□□□□ 0.18
PCDH1Q08174 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
PCDH1Q08174 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
PCDH1Q08174 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PCDH1Q08174 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PCDH1Q08174 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC16.17■□□□□ 0.18
PCDH1Q08174 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
PCDH1Q08174 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
PCDH1Q08174 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC16.17■□□□□ 0.18
PCDH1Q08174 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC16.17■□□□□ 0.18
PCDH1Q08174 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC16.17■□□□□ 0.18
PCDH1Q08174 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
PCDH1Q08174 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
PCDH1Q08174 ATP6V0CP3-201ENST00000417255 467 ntBASIC16.17■□□□□ 0.18
PCDH1Q08174 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
PCDH1Q08174 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC16.17■□□□□ 0.18
PCDH1Q08174 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC16.17■□□□□ 0.18
PCDH1Q08174 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC16.17■□□□□ 0.18
PCDH1Q08174 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
PCDH1Q08174 AL662844.1-201ENST00000546340 181 ntBASIC16.17■□□□□ 0.18
PCDH1Q08174 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC16.17■□□□□ 0.18
PCDH1Q08174 AP001350.2-201ENST00000625104 1094 ntBASIC16.17■□□□□ 0.18
PCDH1Q08174 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC16.17■□□□□ 0.18
PCDH1Q08174 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
PCDH1Q08174 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC16.17■□□□□ 0.18
PCDH1Q08174 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PCDH1Q08174 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
PCDH1Q08174 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PCDH1Q08174 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PCDH1Q08174 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC16.17■□□□□ 0.18
PCDH1Q08174 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC16.17■□□□□ 0.18
PCDH1Q08174 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PCDH1Q08174 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
PCDH1Q08174 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PCDH1Q08174 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PCDH1Q08174 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
PCDH1Q08174 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PCDH1Q08174 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PCDH1Q08174 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
PCDH1Q08174 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PCDH1Q08174 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PCDH1Q08174 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PCDH1Q08174 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PCDH1Q08174 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC16.16■□□□□ 0.18
PCDH1Q08174 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC16.16■□□□□ 0.18
PCDH1Q08174 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PCDH1Q08174 WDR53-204ENST00000433160 887 ntTSL 5 BASIC16.16■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms