Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
HIST1H1AQ02539 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC12.91□□□□□ -0.34
HIST1H1AQ02539 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
HIST1H1AQ02539 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
HIST1H1AQ02539 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC12.91□□□□□ -0.34
HIST1H1AQ02539 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
HIST1H1AQ02539 PPIH-202ENST00000372549 327 ntTSL 3 BASIC12.91□□□□□ -0.34
HIST1H1AQ02539 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
HIST1H1AQ02539 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC12.91□□□□□ -0.34
HIST1H1AQ02539 DRAXINP1-201ENST00000437611 948 ntBASIC12.91□□□□□ -0.34
HIST1H1AQ02539 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
HIST1H1AQ02539 KRT17P6-201ENST00000453795 1220 ntBASIC12.91□□□□□ -0.34
HIST1H1AQ02539 AP000867.3-201ENST00000524675 377 ntBASIC12.91□□□□□ -0.34
HIST1H1AQ02539 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC12.91□□□□□ -0.34
HIST1H1AQ02539 TPSP2-201ENST00000561760 610 ntBASIC12.91□□□□□ -0.34
HIST1H1AQ02539 AC074051.2-201ENST00000565115 352 ntBASIC12.91□□□□□ -0.34
HIST1H1AQ02539 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
HIST1H1AQ02539 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
HIST1H1AQ02539 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC12.91□□□□□ -0.34
HIST1H1AQ02539 AL135999.2-201ENST00000622438 1686 ntBASIC12.91□□□□□ -0.34
HIST1H1AQ02539 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
HIST1H1AQ02539 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
HIST1H1AQ02539 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
HIST1H1AQ02539 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
HIST1H1AQ02539 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
HIST1H1AQ02539 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC12.91□□□□□ -0.34
HIST1H1AQ02539 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
HIST1H1AQ02539 NSUN5P1-202ENST00000421140 1535 ntBASIC12.91□□□□□ -0.34
HIST1H1AQ02539 NSUN5P2-203ENST00000457352 1529 ntBASIC12.91□□□□□ -0.34
HIST1H1AQ02539 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
HIST1H1AQ02539 TCAF2P1-201ENST00000291129 2421 ntBASIC12.91□□□□□ -0.34
HIST1H1AQ02539 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
HIST1H1AQ02539 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
HIST1H1AQ02539 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
HIST1H1AQ02539 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
HIST1H1AQ02539 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC12.91□□□□□ -0.34
HIST1H1AQ02539 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
HIST1H1AQ02539 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
HIST1H1AQ02539 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
HIST1H1AQ02539 AC132872.4-202ENST00000622924 2756 ntBASIC12.91□□□□□ -0.34
HIST1H1AQ02539 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC12.91□□□□□ -0.34
HIST1H1AQ02539 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
HIST1H1AQ02539 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
HIST1H1AQ02539 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC12.9□□□□□ -0.34
HIST1H1AQ02539 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
HIST1H1AQ02539 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC12.9□□□□□ -0.34
HIST1H1AQ02539 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
HIST1H1AQ02539 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC12.9□□□□□ -0.34
HIST1H1AQ02539 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
HIST1H1AQ02539 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
HIST1H1AQ02539 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC12.9□□□□□ -0.34
HIST1H1AQ02539 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
HIST1H1AQ02539 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC12.9□□□□□ -0.34
HIST1H1AQ02539 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC12.9□□□□□ -0.34
HIST1H1AQ02539 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC12.9□□□□□ -0.34
HIST1H1AQ02539 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
HIST1H1AQ02539 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
HIST1H1AQ02539 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
HIST1H1AQ02539 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
HIST1H1AQ02539 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
HIST1H1AQ02539 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
HIST1H1AQ02539 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
HIST1H1AQ02539 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
HIST1H1AQ02539 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC12.9□□□□□ -0.34
HIST1H1AQ02539 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC12.9□□□□□ -0.34
HIST1H1AQ02539 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
HIST1H1AQ02539 AC104819.1-201ENST00000504587 486 ntBASIC12.9□□□□□ -0.34
HIST1H1AQ02539 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC12.9□□□□□ -0.34
HIST1H1AQ02539 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC12.9□□□□□ -0.34
HIST1H1AQ02539 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
HIST1H1AQ02539 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC12.9□□□□□ -0.34
HIST1H1AQ02539 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
HIST1H1AQ02539 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC12.9□□□□□ -0.34
HIST1H1AQ02539 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC12.9□□□□□ -0.34
HIST1H1AQ02539 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC12.9□□□□□ -0.34
HIST1H1AQ02539 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
HIST1H1AQ02539 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC12.9□□□□□ -0.34
HIST1H1AQ02539 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
HIST1H1AQ02539 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC12.9□□□□□ -0.34
HIST1H1AQ02539 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC12.9□□□□□ -0.34
HIST1H1AQ02539 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
HIST1H1AQ02539 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
HIST1H1AQ02539 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC12.9□□□□□ -0.34
HIST1H1AQ02539 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
HIST1H1AQ02539 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
HIST1H1AQ02539 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
HIST1H1AQ02539 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC12.9□□□□□ -0.34
HIST1H1AQ02539 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
HIST1H1AQ02539 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC12.9□□□□□ -0.34
HIST1H1AQ02539 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
HIST1H1AQ02539 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
HIST1H1AQ02539 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
HIST1H1AQ02539 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
HIST1H1AQ02539 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC12.9□□□□□ -0.34
HIST1H1AQ02539 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC12.9□□□□□ -0.34
HIST1H1AQ02539 AC132938.5-201ENST00000624980 1813 ntBASIC12.9□□□□□ -0.34
HIST1H1AQ02539 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC12.9□□□□□ -0.34
HIST1H1AQ02539 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC12.9□□□□□ -0.35
HIST1H1AQ02539 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC12.9□□□□□ -0.35
HIST1H1AQ02539 LINC02228-204ENST00000642115 2962 ntBASIC12.9□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms