Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC14.55□□□□□ -0.08
UBA52P62987 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
UBA52P62987 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
UBA52P62987 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
UBA52P62987 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
UBA52P62987 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
UBA52P62987 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
UBA52P62987 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
UBA52P62987 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
UBA52P62987 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
UBA52P62987 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
UBA52P62987 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
UBA52P62987 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
UBA52P62987 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
UBA52P62987 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
UBA52P62987 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC14.55□□□□□ -0.08
UBA52P62987 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC14.55□□□□□ -0.08
UBA52P62987 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
UBA52P62987 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
UBA52P62987 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
UBA52P62987 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
UBA52P62987 AC132008.2-207ENST00000454517 770 ntBASIC14.55□□□□□ -0.08
UBA52P62987 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC14.55□□□□□ -0.08
UBA52P62987 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC14.55□□□□□ -0.08
UBA52P62987 AC008687.5-201ENST00000593746 558 ntBASIC14.55□□□□□ -0.08
UBA52P62987 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC14.55□□□□□ -0.08
UBA52P62987 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC14.55□□□□□ -0.08
UBA52P62987 AC148477.8-201ENST00000624298 468 ntBASIC14.55□□□□□ -0.08
UBA52P62987 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
UBA52P62987 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
UBA52P62987 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC14.55□□□□□ -0.08
UBA52P62987 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
UBA52P62987 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC14.55□□□□□ -0.08
UBA52P62987 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
UBA52P62987 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC14.55□□□□□ -0.08
UBA52P62987 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
UBA52P62987 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC14.55□□□□□ -0.08
UBA52P62987 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
UBA52P62987 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC14.55□□□□□ -0.08
UBA52P62987 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC14.55□□□□□ -0.08
UBA52P62987 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
UBA52P62987 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
UBA52P62987 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
UBA52P62987 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC14.55□□□□□ -0.08
UBA52P62987 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
UBA52P62987 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
UBA52P62987 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
UBA52P62987 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC14.54□□□□□ -0.08
UBA52P62987 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC14.54□□□□□ -0.08
UBA52P62987 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
UBA52P62987 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
UBA52P62987 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC14.54□□□□□ -0.08
UBA52P62987 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC14.54□□□□□ -0.08
UBA52P62987 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
UBA52P62987 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
UBA52P62987 PAUPAR-201ENST00000630360 2965 ntBASIC14.54□□□□□ -0.08
UBA52P62987 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
UBA52P62987 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
UBA52P62987 HIST2H3DP1-201ENST00000401004 416 ntBASIC14.54□□□□□ -0.08
UBA52P62987 AC073648.2-201ENST00000510116 352 ntBASIC14.54□□□□□ -0.08
UBA52P62987 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC14.54□□□□□ -0.08
UBA52P62987 AC092865.5-201ENST00000545435 363 ntBASIC14.54□□□□□ -0.08
UBA52P62987 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
UBA52P62987 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC14.54□□□□□ -0.08
UBA52P62987 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC14.54□□□□□ -0.08
UBA52P62987 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC14.54□□□□□ -0.08
UBA52P62987 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
UBA52P62987 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC14.54□□□□□ -0.08
UBA52P62987 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
UBA52P62987 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
UBA52P62987 AL163051.1-201ENST00000569214 1512 ntBASIC14.54□□□□□ -0.08
UBA52P62987 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC14.54□□□□□ -0.08
UBA52P62987 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
UBA52P62987 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
UBA52P62987 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC14.54□□□□□ -0.08
UBA52P62987 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
UBA52P62987 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
UBA52P62987 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
UBA52P62987 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
UBA52P62987 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
UBA52P62987 FLJ16779-201ENST00000612722 7638 ntBASIC14.54□□□□□ -0.08
UBA52P62987 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
UBA52P62987 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
UBA52P62987 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
UBA52P62987 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
UBA52P62987 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC14.54□□□□□ -0.08
UBA52P62987 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
UBA52P62987 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
UBA52P62987 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC14.53□□□□□ -0.08
UBA52P62987 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
UBA52P62987 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
UBA52P62987 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
UBA52P62987 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC14.53□□□□□ -0.08
UBA52P62987 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC14.53□□□□□ -0.08
UBA52P62987 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC14.53□□□□□ -0.08
UBA52P62987 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
UBA52P62987 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC14.53□□□□□ -0.08
UBA52P62987 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
UBA52P62987 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
UBA52P62987 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms