Protein–RNA interactions for Protein: P58418

CLRN1, Clarin-1, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1P58418 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CLRN1P58418 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC15.01□□□□□ -0.01
CLRN1P58418 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CLRN1P58418 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC15.01□□□□□ -0.01
CLRN1P58418 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC15.01□□□□□ -0.01
CLRN1P58418 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CLRN1P58418 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC15.01□□□□□ -0.01
CLRN1P58418 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
CLRN1P58418 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC15.01□□□□□ -0.01
CLRN1P58418 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC15.01□□□□□ -0.01
CLRN1P58418 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CLRN1P58418 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CLRN1P58418 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
CLRN1P58418 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC15.01□□□□□ -0.01
CLRN1P58418 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC15.01□□□□□ -0.01
CLRN1P58418 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
CLRN1P58418 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC15.01□□□□□ -0.01
CLRN1P58418 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CLRN1P58418 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC15.01□□□□□ -0.01
CLRN1P58418 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CLRN1P58418 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC15.01□□□□□ -0.01
CLRN1P58418 AC079328.2-201ENST00000561241 3354 ntBASIC15.01□□□□□ -0.01
CLRN1P58418 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC15.01□□□□□ -0.01
CLRN1P58418 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
CLRN1P58418 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC15.01□□□□□ -0.01
CLRN1P58418 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CLRN1P58418 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CLRN1P58418 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CLRN1P58418 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CLRN1P58418 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CLRN1P58418 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CLRN1P58418 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CLRN1P58418 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CLRN1P58418 AP002414.3-201ENST00000589352 1468 ntBASIC15.01□□□□□ -0.01
CLRN1P58418 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC15□□□□□ -0.01
CLRN1P58418 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC15□□□□□ -0.01
CLRN1P58418 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC15□□□□□ -0.01
CLRN1P58418 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC15□□□□□ -0.01
CLRN1P58418 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC15□□□□□ -0.01
CLRN1P58418 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC15□□□□□ -0.01
CLRN1P58418 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC15□□□□□ -0.01
CLRN1P58418 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC15□□□□□ -0.01
CLRN1P58418 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC15□□□□□ -0.01
CLRN1P58418 AC063926.3-201ENST00000624734 5658 ntBASIC15□□□□□ -0.01
CLRN1P58418 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC15□□□□□ -0.01
CLRN1P58418 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC15□□□□□ -0.01
CLRN1P58418 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC15□□□□□ -0.01
CLRN1P58418 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CLRN1P58418 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CLRN1P58418 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC15□□□□□ -0.01
CLRN1P58418 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC15□□□□□ -0.01
CLRN1P58418 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC15□□□□□ -0.01
CLRN1P58418 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC15□□□□□ -0.01
CLRN1P58418 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC15□□□□□ -0.01
CLRN1P58418 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC15□□□□□ -0.01
CLRN1P58418 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC15□□□□□ -0.01
CLRN1P58418 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CLRN1P58418 AC008667.4-201ENST00000607370 168 ntBASIC15□□□□□ -0.01
CLRN1P58418 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC15□□□□□ -0.01
CLRN1P58418 AC148477.8-201ENST00000624298 468 ntBASIC15□□□□□ -0.01
CLRN1P58418 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
CLRN1P58418 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC15□□□□□ -0.01
CLRN1P58418 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC15□□□□□ -0.01
CLRN1P58418 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CLRN1P58418 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
CLRN1P58418 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CLRN1P58418 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CLRN1P58418 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC15□□□□□ -0.01
CLRN1P58418 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CLRN1P58418 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC15□□□□□ -0.01
CLRN1P58418 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC15□□□□□ -0.01
CLRN1P58418 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CLRN1P58418 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CLRN1P58418 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
CLRN1P58418 HLA-A-202ENST00000376806 1854 ntBASIC14.99□□□□□ -0.01
CLRN1P58418 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC14.99□□□□□ -0.01
CLRN1P58418 AC006277.1-201ENST00000624348 1610 ntBASIC14.99□□□□□ -0.01
CLRN1P58418 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC14.99□□□□□ -0.01
CLRN1P58418 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CLRN1P58418 AL118508.1-201ENST00000613502 2345 ntBASIC14.99□□□□□ -0.01
CLRN1P58418 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CLRN1P58418 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC14.99□□□□□ -0.01
CLRN1P58418 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
CLRN1P58418 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
CLRN1P58418 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC14.99□□□□□ -0.01
CLRN1P58418 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
CLRN1P58418 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
CLRN1P58418 AC092171.3-201ENST00000610122 2651 ntBASIC14.99□□□□□ -0.01
CLRN1P58418 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
CLRN1P58418 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CLRN1P58418 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC14.99□□□□□ -0.01
CLRN1P58418 TPM4P1-201ENST00000436100 807 ntBASIC14.99□□□□□ -0.01
CLRN1P58418 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC14.99□□□□□ -0.01
CLRN1P58418 AC092910.1-201ENST00000482027 1129 ntBASIC14.99□□□□□ -0.01
CLRN1P58418 SLC25A6P2-201ENST00000497974 877 ntBASIC14.99□□□□□ -0.01
CLRN1P58418 AC093909.1-201ENST00000504731 1122 ntBASIC14.99□□□□□ -0.01
CLRN1P58418 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC14.99□□□□□ -0.01
CLRN1P58418 AP002469.2-201ENST00000531724 424 ntBASIC14.99□□□□□ -0.01
CLRN1P58418 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC14.99□□□□□ -0.01
CLRN1P58418 AL160237.2-201ENST00000556165 472 ntBASIC14.99□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms