Protein–RNA interactions for Protein: P56746

CLDN15, Claudin-15, humanhuman

Predictions only

Length 228 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN15P56746 CFL1-202ENST00000524553 860 ntTSL 2 BASIC15.04■□□□□ -0
CLDN15P56746 AP002490.2-201ENST00000524791 560 ntBASIC15.04■□□□□ -0
CLDN15P56746 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC15.04■□□□□ -0
CLDN15P56746 AP001160.2-201ENST00000596071 487 ntBASIC15.04■□□□□ -0
CLDN15P56746 AC013467.2-201ENST00000605472 835 ntBASIC15.04■□□□□ -0
CLDN15P56746 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CLDN15P56746 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CLDN15P56746 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CLDN15P56746 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC15.04■□□□□ -0
CLDN15P56746 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC15.04■□□□□ -0
CLDN15P56746 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC15.04■□□□□ -0
CLDN15P56746 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
CLDN15P56746 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC15.03■□□□□ -0
CLDN15P56746 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CLDN15P56746 LINC00895-201ENST00000629028 1637 ntBASIC15.03■□□□□ -0
CLDN15P56746 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC15.03■□□□□ -0
CLDN15P56746 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
CLDN15P56746 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CLDN15P56746 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC15.03■□□□□ -0
CLDN15P56746 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC15.03■□□□□ -0
CLDN15P56746 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CLDN15P56746 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CLDN15P56746 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC15.03■□□□□ -0
CLDN15P56746 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CLDN15P56746 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CLDN15P56746 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC15.03■□□□□ -0
CLDN15P56746 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
CLDN15P56746 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC15.03■□□□□ -0
CLDN15P56746 STARD13-205ENST00000439831 945 ntTSL 2 BASIC15.03■□□□□ -0
CLDN15P56746 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC15.03■□□□□ -0
CLDN15P56746 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC15.03■□□□□ -0
CLDN15P56746 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC15.03■□□□□ -0
CLDN15P56746 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC15.03■□□□□ -0
CLDN15P56746 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC15.03■□□□□ -0
CLDN15P56746 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC15.03■□□□□ -0
CLDN15P56746 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
CLDN15P56746 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC15.03■□□□□ -0
CLDN15P56746 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC15.03■□□□□ -0
CLDN15P56746 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC15.03■□□□□ -0
CLDN15P56746 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC15.03■□□□□ -0
CLDN15P56746 AC079781.4-201ENST00000641908 219 ntBASIC15.03■□□□□ -0
CLDN15P56746 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CLDN15P56746 AC005915.1-201ENST00000624912 2018 ntBASIC15.03■□□□□ -0
CLDN15P56746 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC15.03■□□□□ -0
CLDN15P56746 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC15.03■□□□□ -0
CLDN15P56746 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CLDN15P56746 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
CLDN15P56746 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
CLDN15P56746 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
CLDN15P56746 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC15.03■□□□□ -0
CLDN15P56746 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC15.03■□□□□ -0
CLDN15P56746 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
CLDN15P56746 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
CLDN15P56746 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC15.03■□□□□ -0
CLDN15P56746 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC15.02■□□□□ -0
CLDN15P56746 AC105020.1-201ENST00000435356 2205 ntBASIC15.02■□□□□ -0
CLDN15P56746 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC15.02■□□□□ -0
CLDN15P56746 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CLDN15P56746 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
CLDN15P56746 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC15.02■□□□□ -0
CLDN15P56746 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC15.02■□□□□ -0
CLDN15P56746 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CLDN15P56746 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC15.02■□□□□ -0
CLDN15P56746 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC15.02■□□□□ -0
CLDN15P56746 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CLDN15P56746 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC15.02■□□□□ -0
CLDN15P56746 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC15.02■□□□□ -0
CLDN15P56746 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC15.02■□□□□ -0
CLDN15P56746 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CLDN15P56746 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
CLDN15P56746 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC15.02■□□□□ -0
CLDN15P56746 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CLDN15P56746 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC15.02■□□□□ -0
CLDN15P56746 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC15.02■□□□□ -0
CLDN15P56746 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
CLDN15P56746 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC15.02■□□□□ -0
CLDN15P56746 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CLDN15P56746 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC15.02■□□□□ -0
CLDN15P56746 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC15.02■□□□□ -0
CLDN15P56746 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC15.02■□□□□ -0
CLDN15P56746 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC15.02■□□□□ -0
CLDN15P56746 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC15.02■□□□□ -0
CLDN15P56746 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC15.02■□□□□ -0
CLDN15P56746 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
CLDN15P56746 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC15.02■□□□□ -0
CLDN15P56746 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
CLDN15P56746 AC109635.5-201ENST00000533593 962 ntBASIC15.02■□□□□ -0
CLDN15P56746 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC15.02■□□□□ -0
CLDN15P56746 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC15.02■□□□□ -0
CLDN15P56746 AL031055.1-201ENST00000606362 631 ntBASIC15.02■□□□□ -0
CLDN15P56746 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC15.02■□□□□ -0
CLDN15P56746 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
CLDN15P56746 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC15.02■□□□□ -0
CLDN15P56746 AC105339.1-204ENST00000636249 355 ntBASIC15.02■□□□□ -0
CLDN15P56746 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
CLDN15P56746 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
CLDN15P56746 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
CLDN15P56746 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
CLDN15P56746 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC15.02□□□□□ -0.01
CLDN15P56746 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms