Protein–RNA interactions for Protein: P55771

PAX9, Paired box protein Pax-9, humanhuman

Predictions only

Length 341 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAX9P55771 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
PAX9P55771 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
PAX9P55771 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC13.49□□□□□ -0.25
PAX9P55771 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
PAX9P55771 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
PAX9P55771 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
PAX9P55771 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
PAX9P55771 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
PAX9P55771 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
PAX9P55771 CASK-202ENST00000378158 3848 ntTSL 5 BASIC13.49□□□□□ -0.25
PAX9P55771 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC13.49□□□□□ -0.25
PAX9P55771 AC009533.2-201ENST00000543664 586 ntBASIC13.49□□□□□ -0.25
PAX9P55771 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC13.49□□□□□ -0.25
PAX9P55771 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC13.49□□□□□ -0.25
PAX9P55771 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
PAX9P55771 AL512652.2-201ENST00000625156 1716 ntBASIC13.49□□□□□ -0.25
PAX9P55771 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC13.49□□□□□ -0.25
PAX9P55771 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
PAX9P55771 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
PAX9P55771 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
PAX9P55771 AL136379.1-201ENST00000623471 2642 ntBASIC13.49□□□□□ -0.25
PAX9P55771 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
PAX9P55771 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC13.49□□□□□ -0.25
PAX9P55771 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC13.49□□□□□ -0.25
PAX9P55771 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
PAX9P55771 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
PAX9P55771 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC13.49□□□□□ -0.25
PAX9P55771 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
PAX9P55771 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
PAX9P55771 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC13.48□□□□□ -0.25
PAX9P55771 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC13.48□□□□□ -0.25
PAX9P55771 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
PAX9P55771 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
PAX9P55771 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
PAX9P55771 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
PAX9P55771 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
PAX9P55771 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
PAX9P55771 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
PAX9P55771 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
PAX9P55771 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
PAX9P55771 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
PAX9P55771 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
PAX9P55771 CDC14C-201ENST00000428251 1719 ntBASIC13.48□□□□□ -0.25
PAX9P55771 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
PAX9P55771 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC13.48□□□□□ -0.25
PAX9P55771 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC13.48□□□□□ -0.25
PAX9P55771 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
PAX9P55771 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC13.48□□□□□ -0.25
PAX9P55771 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
PAX9P55771 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC13.48□□□□□ -0.25
PAX9P55771 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC13.48□□□□□ -0.25
PAX9P55771 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC13.48□□□□□ -0.25
PAX9P55771 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC13.48□□□□□ -0.25
PAX9P55771 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC13.48□□□□□ -0.25
PAX9P55771 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC13.48□□□□□ -0.25
PAX9P55771 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC13.48□□□□□ -0.25
PAX9P55771 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
PAX9P55771 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC13.48□□□□□ -0.25
PAX9P55771 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC13.48□□□□□ -0.25
PAX9P55771 AC011840.4-201ENST00000578471 627 ntBASIC13.48□□□□□ -0.25
PAX9P55771 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
PAX9P55771 AC011467.2-201ENST00000598425 242 ntBASIC13.48□□□□□ -0.25
PAX9P55771 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC13.48□□□□□ -0.25
PAX9P55771 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC13.48□□□□□ -0.25
PAX9P55771 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC13.48□□□□□ -0.25
PAX9P55771 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
PAX9P55771 AC148477.5-201ENST00000625164 1645 ntBASIC13.48□□□□□ -0.25
PAX9P55771 AC099063.4-201ENST00000641099 1602 ntBASIC13.48□□□□□ -0.25
PAX9P55771 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
PAX9P55771 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
PAX9P55771 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
PAX9P55771 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC13.48□□□□□ -0.25
PAX9P55771 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC13.48□□□□□ -0.25
PAX9P55771 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
PAX9P55771 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC13.48□□□□□ -0.25
PAX9P55771 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
PAX9P55771 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC13.48□□□□□ -0.25
PAX9P55771 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
PAX9P55771 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
PAX9P55771 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
PAX9P55771 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
PAX9P55771 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
PAX9P55771 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
PAX9P55771 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
PAX9P55771 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
PAX9P55771 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
PAX9P55771 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
PAX9P55771 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC13.48□□□□□ -0.25
PAX9P55771 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
PAX9P55771 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC13.47□□□□□ -0.25
PAX9P55771 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
PAX9P55771 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
PAX9P55771 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC13.47□□□□□ -0.25
PAX9P55771 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
PAX9P55771 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
PAX9P55771 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC13.47□□□□□ -0.25
PAX9P55771 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC13.47□□□□□ -0.25
PAX9P55771 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
PAX9P55771 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
PAX9P55771 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC13.47□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms