Protein–RNA interactions for Protein: P55056

APOC4, Apolipoprotein C-IV, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC4P55056 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
APOC4P55056 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC12.27□□□□□ -0.45
APOC4P55056 PNMT-202ENST00000394246 821 ntTSL 2 BASIC12.27□□□□□ -0.45
APOC4P55056 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC12.27□□□□□ -0.45
APOC4P55056 GGCT-205ENST00000409436 954 ntTSL 3 BASIC12.27□□□□□ -0.45
APOC4P55056 TSEN15P1-201ENST00000423257 515 ntBASIC12.27□□□□□ -0.45
APOC4P55056 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC12.27□□□□□ -0.45
APOC4P55056 AC023141.5-201ENST00000458585 616 ntBASIC12.27□□□□□ -0.45
APOC4P55056 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC12.27□□□□□ -0.45
APOC4P55056 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
APOC4P55056 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.45
APOC4P55056 TSFM-210ENST00000550559 897 ntTSL 5 BASIC12.27□□□□□ -0.45
APOC4P55056 AL135744.1-201ENST00000565098 629 ntBASIC12.27□□□□□ -0.45
APOC4P55056 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC12.27□□□□□ -0.45
APOC4P55056 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC12.27□□□□□ -0.45
APOC4P55056 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
APOC4P55056 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC12.27□□□□□ -0.45
APOC4P55056 AC022145.2-201ENST00000598203 171 ntBASIC12.27□□□□□ -0.45
APOC4P55056 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC12.27□□□□□ -0.45
APOC4P55056 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
APOC4P55056 AC099522.2-201ENST00000607001 744 ntBASIC12.27□□□□□ -0.45
APOC4P55056 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC12.27□□□□□ -0.45
APOC4P55056 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
APOC4P55056 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC12.27□□□□□ -0.45
APOC4P55056 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC12.27□□□□□ -0.45
APOC4P55056 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC12.27□□□□□ -0.45
APOC4P55056 HARS-204ENST00000438307 1789 ntTSL 2 BASIC12.27□□□□□ -0.45
APOC4P55056 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
APOC4P55056 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
APOC4P55056 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
APOC4P55056 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
APOC4P55056 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC12.27□□□□□ -0.45
APOC4P55056 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
APOC4P55056 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC12.27□□□□□ -0.45
APOC4P55056 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
APOC4P55056 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC12.27□□□□□ -0.45
APOC4P55056 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
APOC4P55056 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
APOC4P55056 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
APOC4P55056 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
APOC4P55056 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
APOC4P55056 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC12.27□□□□□ -0.45
APOC4P55056 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
APOC4P55056 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC12.26□□□□□ -0.45
APOC4P55056 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
APOC4P55056 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC12.26□□□□□ -0.45
APOC4P55056 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
APOC4P55056 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
APOC4P55056 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
APOC4P55056 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
APOC4P55056 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC12.26□□□□□ -0.45
APOC4P55056 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC12.26□□□□□ -0.45
APOC4P55056 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
APOC4P55056 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
APOC4P55056 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
APOC4P55056 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
APOC4P55056 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
APOC4P55056 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC12.26□□□□□ -0.45
APOC4P55056 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
APOC4P55056 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
APOC4P55056 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
APOC4P55056 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
APOC4P55056 AC004461.1-201ENST00000412461 403 ntBASIC12.26□□□□□ -0.45
APOC4P55056 AC092474.2-201ENST00000424288 719 ntBASIC12.26□□□□□ -0.45
APOC4P55056 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC12.26□□□□□ -0.45
APOC4P55056 AL592309.1-201ENST00000443127 649 ntBASIC12.26□□□□□ -0.45
APOC4P55056 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC12.26□□□□□ -0.45
APOC4P55056 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC12.26□□□□□ -0.45
APOC4P55056 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
APOC4P55056 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC12.26□□□□□ -0.45
APOC4P55056 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC12.26□□□□□ -0.45
APOC4P55056 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC12.26□□□□□ -0.45
APOC4P55056 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
APOC4P55056 DUX4L17-201ENST00000557360 1267 ntBASIC12.26□□□□□ -0.45
APOC4P55056 AC025678.2-201ENST00000562061 970 ntBASIC12.26□□□□□ -0.45
APOC4P55056 AC004449.1-201ENST00000564240 433 ntBASIC12.26□□□□□ -0.45
APOC4P55056 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
APOC4P55056 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC12.26□□□□□ -0.45
APOC4P55056 METTL23-205ENST00000588302 925 ntTSL 5 BASIC12.26□□□□□ -0.45
APOC4P55056 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
APOC4P55056 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC12.26□□□□□ -0.45
APOC4P55056 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC12.26□□□□□ -0.45
APOC4P55056 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC12.26□□□□□ -0.45
APOC4P55056 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC12.26□□□□□ -0.45
APOC4P55056 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
APOC4P55056 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC12.26□□□□□ -0.45
APOC4P55056 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
APOC4P55056 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC12.26□□□□□ -0.45
APOC4P55056 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
APOC4P55056 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC12.26□□□□□ -0.45
APOC4P55056 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
APOC4P55056 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC12.26□□□□□ -0.45
APOC4P55056 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC12.26□□□□□ -0.45
APOC4P55056 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
APOC4P55056 AC108860.2-201ENST00000562760 2183 ntBASIC12.26□□□□□ -0.45
APOC4P55056 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
APOC4P55056 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
APOC4P55056 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
APOC4P55056 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
APOC4P55056 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 47.6 ms