Protein–RNA interactions for Protein: P54289

CACNA2D1, Voltage-dependent calcium channel subunit alpha-2/delta-1, humanhuman

Predictions only

Length 1,103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA2D1P54289 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CACNA2D1P54289 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
CACNA2D1P54289 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CACNA2D1P54289 ADH5P3-201ENST00000433842 1137 ntBASIC17.76■□□□□ 0.43
CACNA2D1P54289 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CACNA2D1P54289 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC17.76■□□□□ 0.43
CACNA2D1P54289 CFL1-202ENST00000524553 860 ntTSL 2 BASIC17.76■□□□□ 0.43
CACNA2D1P54289 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC17.76■□□□□ 0.43
CACNA2D1P54289 THTPA-204ENST00000554970 569 ntTSL 4 BASIC17.76■□□□□ 0.43
CACNA2D1P54289 THTPA-206ENST00000556015 535 ntTSL 3 BASIC17.76■□□□□ 0.43
CACNA2D1P54289 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC17.76■□□□□ 0.43
CACNA2D1P54289 AP001160.2-201ENST00000596071 487 ntBASIC17.76■□□□□ 0.43
CACNA2D1P54289 WT1-AS_2.1-201ENST00000613208 137 ntBASIC17.76■□□□□ 0.43
CACNA2D1P54289 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC17.76■□□□□ 0.43
CACNA2D1P54289 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CACNA2D1P54289 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CACNA2D1P54289 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CACNA2D1P54289 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC17.76■□□□□ 0.43
CACNA2D1P54289 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
CACNA2D1P54289 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CACNA2D1P54289 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
CACNA2D1P54289 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
CACNA2D1P54289 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC17.76■□□□□ 0.43
CACNA2D1P54289 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CACNA2D1P54289 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
CACNA2D1P54289 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CACNA2D1P54289 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC17.75■□□□□ 0.43
CACNA2D1P54289 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CACNA2D1P54289 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
CACNA2D1P54289 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
CACNA2D1P54289 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC17.75■□□□□ 0.43
CACNA2D1P54289 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CACNA2D1P54289 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC17.75■□□□□ 0.43
CACNA2D1P54289 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC17.75■□□□□ 0.43
CACNA2D1P54289 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC17.75■□□□□ 0.43
CACNA2D1P54289 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
CACNA2D1P54289 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CACNA2D1P54289 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC17.75■□□□□ 0.43
CACNA2D1P54289 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC17.75■□□□□ 0.43
CACNA2D1P54289 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
CACNA2D1P54289 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC17.75■□□□□ 0.43
CACNA2D1P54289 AP006288.1-201ENST00000446065 395 ntBASIC17.75■□□□□ 0.43
CACNA2D1P54289 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC17.75■□□□□ 0.43
CACNA2D1P54289 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC17.75■□□□□ 0.43
CACNA2D1P54289 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC17.75■□□□□ 0.43
CACNA2D1P54289 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC17.75■□□□□ 0.43
CACNA2D1P54289 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC17.75■□□□□ 0.43
CACNA2D1P54289 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC17.75■□□□□ 0.43
CACNA2D1P54289 IGHV3OR16-6-201ENST00000568775 360 ntBASIC17.75■□□□□ 0.43
CACNA2D1P54289 AL596442.2-201ENST00000610240 980 ntBASIC17.75■□□□□ 0.43
CACNA2D1P54289 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC17.75■□□□□ 0.43
CACNA2D1P54289 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
CACNA2D1P54289 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CACNA2D1P54289 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CACNA2D1P54289 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC17.75■□□□□ 0.43
CACNA2D1P54289 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
CACNA2D1P54289 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC17.75■□□□□ 0.43
CACNA2D1P54289 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CACNA2D1P54289 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC17.75■□□□□ 0.43
CACNA2D1P54289 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC17.75■□□□□ 0.43
CACNA2D1P54289 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC17.75■□□□□ 0.43
CACNA2D1P54289 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
CACNA2D1P54289 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC17.75■□□□□ 0.43
CACNA2D1P54289 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CACNA2D1P54289 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CACNA2D1P54289 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CACNA2D1P54289 AL671710.1-201ENST00000610245 2349 ntBASIC17.75■□□□□ 0.43
CACNA2D1P54289 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
CACNA2D1P54289 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC17.75■□□□□ 0.43
CACNA2D1P54289 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CACNA2D1P54289 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CACNA2D1P54289 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CACNA2D1P54289 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CACNA2D1P54289 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CACNA2D1P54289 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC17.74■□□□□ 0.43
CACNA2D1P54289 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC17.74■□□□□ 0.43
CACNA2D1P54289 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CACNA2D1P54289 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CACNA2D1P54289 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
CACNA2D1P54289 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
CACNA2D1P54289 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC17.74■□□□□ 0.43
CACNA2D1P54289 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CACNA2D1P54289 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CACNA2D1P54289 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
CACNA2D1P54289 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CACNA2D1P54289 HCG4-201ENST00000418983 998 ntBASIC17.74■□□□□ 0.43
CACNA2D1P54289 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC17.74■□□□□ 0.43
CACNA2D1P54289 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC17.74■□□□□ 0.43
CACNA2D1P54289 AC092183.1-201ENST00000469884 875 ntBASIC17.74■□□□□ 0.43
CACNA2D1P54289 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC17.74■□□□□ 0.43
CACNA2D1P54289 AC087641.1-201ENST00000557561 1021 ntBASIC17.74■□□□□ 0.43
CACNA2D1P54289 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC17.74■□□□□ 0.43
CACNA2D1P54289 CYP2A7P1-201ENST00000595391 815 ntBASIC17.74■□□□□ 0.43
CACNA2D1P54289 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC17.74■□□□□ 0.43
CACNA2D1P54289 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC17.74■□□□□ 0.43
CACNA2D1P54289 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC17.74■□□□□ 0.43
CACNA2D1P54289 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CACNA2D1P54289 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
CACNA2D1P54289 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
CACNA2D1P54289 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC17.74■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms