Protein–RNA interactions for Protein: P51793

CLCN4, H(+)/Cl(-) exchange transporter 4, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4P51793 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC17.53■□□□□ 0.4
CLCN4P51793 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC17.53■□□□□ 0.4
CLCN4P51793 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC17.53■□□□□ 0.4
CLCN4P51793 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
CLCN4P51793 AL596325.1-201ENST00000563991 1082 ntBASIC17.53■□□□□ 0.4
CLCN4P51793 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC17.53■□□□□ 0.4
CLCN4P51793 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC17.53■□□□□ 0.4
CLCN4P51793 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CLCN4P51793 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
CLCN4P51793 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
CLCN4P51793 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
CLCN4P51793 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC17.53■□□□□ 0.4
CLCN4P51793 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC17.53■□□□□ 0.4
CLCN4P51793 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
CLCN4P51793 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
CLCN4P51793 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
CLCN4P51793 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
CLCN4P51793 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
CLCN4P51793 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC17.53■□□□□ 0.4
CLCN4P51793 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CLCN4P51793 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
CLCN4P51793 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CLCN4P51793 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
CLCN4P51793 AL035456.1-201ENST00000456064 1369 ntBASIC17.53■□□□□ 0.4
CLCN4P51793 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
CLCN4P51793 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CLCN4P51793 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CLCN4P51793 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CLCN4P51793 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CLCN4P51793 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
CLCN4P51793 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CLCN4P51793 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
CLCN4P51793 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CLCN4P51793 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CLCN4P51793 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CLCN4P51793 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CLCN4P51793 CALY-202ENST00000368555 783 ntTSL 2 BASIC17.52■□□□□ 0.4
CLCN4P51793 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC17.52■□□□□ 0.4
CLCN4P51793 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC17.52■□□□□ 0.4
CLCN4P51793 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC17.52■□□□□ 0.4
CLCN4P51793 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC17.52■□□□□ 0.4
CLCN4P51793 NME2P1-201ENST00000426182 414 ntBASIC17.52■□□□□ 0.4
CLCN4P51793 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC17.52■□□□□ 0.4
CLCN4P51793 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
CLCN4P51793 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC17.52■□□□□ 0.4
CLCN4P51793 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
CLCN4P51793 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC17.52■□□□□ 0.4
CLCN4P51793 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC17.52■□□□□ 0.4
CLCN4P51793 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC17.52■□□□□ 0.4
CLCN4P51793 AC004233.3-201ENST00000607794 1269 ntBASIC17.52■□□□□ 0.4
CLCN4P51793 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC17.52■□□□□ 0.4
CLCN4P51793 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CLCN4P51793 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC17.52■□□□□ 0.4
CLCN4P51793 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
CLCN4P51793 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
CLCN4P51793 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC17.52■□□□□ 0.39
CLCN4P51793 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
CLCN4P51793 FST-202ENST00000396947 2538 ntTSL 5 BASIC17.52■□□□□ 0.39
CLCN4P51793 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
CLCN4P51793 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC17.52■□□□□ 0.39
CLCN4P51793 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CLCN4P51793 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CLCN4P51793 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CLCN4P51793 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
CLCN4P51793 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CLCN4P51793 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CLCN4P51793 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CLCN4P51793 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CLCN4P51793 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CLCN4P51793 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC17.51■□□□□ 0.39
CLCN4P51793 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CLCN4P51793 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CLCN4P51793 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC17.51■□□□□ 0.39
CLCN4P51793 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC17.51■□□□□ 0.39
CLCN4P51793 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
CLCN4P51793 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CLCN4P51793 AC009477.1-201ENST00000452936 217 ntBASIC17.51■□□□□ 0.39
CLCN4P51793 TMPRSS11CP-201ENST00000453277 683 ntBASIC17.51■□□□□ 0.39
CLCN4P51793 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CLCN4P51793 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
CLCN4P51793 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC17.51■□□□□ 0.39
CLCN4P51793 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
CLCN4P51793 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC17.51■□□□□ 0.39
CLCN4P51793 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC17.51■□□□□ 0.39
CLCN4P51793 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC17.51■□□□□ 0.39
CLCN4P51793 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC17.51■□□□□ 0.39
CLCN4P51793 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CLCN4P51793 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CLCN4P51793 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CLCN4P51793 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CLCN4P51793 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CLCN4P51793 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CLCN4P51793 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
CLCN4P51793 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC17.51■□□□□ 0.39
CLCN4P51793 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CLCN4P51793 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
CLCN4P51793 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC17.5■□□□□ 0.39
CLCN4P51793 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
CLCN4P51793 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
CLCN4P51793 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms