Protein–RNA interactions for Protein: P51160

PDE6C, Cone cGMP-specific 3',5'-cyclic phosphodiesterase subunit alpha', humanhuman

Predictions only

Length 858 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6CP51160 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
PDE6CP51160 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC18.14■□□□□ 0.49
PDE6CP51160 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PDE6CP51160 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC18.14■□□□□ 0.49
PDE6CP51160 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
PDE6CP51160 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PDE6CP51160 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
PDE6CP51160 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
PDE6CP51160 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PDE6CP51160 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
PDE6CP51160 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC18.14■□□□□ 0.49
PDE6CP51160 ATP6V0CP3-201ENST00000417255 467 ntBASIC18.14■□□□□ 0.49
PDE6CP51160 DNAJB3-201ENST00000446806 729 ntBASIC18.14■□□□□ 0.49
PDE6CP51160 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC18.14■□□□□ 0.49
PDE6CP51160 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC18.14■□□□□ 0.49
PDE6CP51160 AC008667.4-201ENST00000607370 168 ntBASIC18.14■□□□□ 0.49
PDE6CP51160 AL805961.1-202ENST00000641562 540 ntBASIC18.14■□□□□ 0.49
PDE6CP51160 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC18.14■□□□□ 0.49
PDE6CP51160 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC18.14■□□□□ 0.49
PDE6CP51160 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PDE6CP51160 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
PDE6CP51160 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
PDE6CP51160 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
PDE6CP51160 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
PDE6CP51160 UBALD1-205ENST00000590891 2641 ntBASIC18.14■□□□□ 0.49
PDE6CP51160 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC18.14■□□□□ 0.49
PDE6CP51160 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC18.14■□□□□ 0.49
PDE6CP51160 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC18.14■□□□□ 0.49
PDE6CP51160 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC18.14■□□□□ 0.49
PDE6CP51160 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
PDE6CP51160 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PDE6CP51160 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC18.14■□□□□ 0.49
PDE6CP51160 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
PDE6CP51160 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC18.13■□□□□ 0.49
PDE6CP51160 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC18.13■□□□□ 0.49
PDE6CP51160 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC18.13■□□□□ 0.49
PDE6CP51160 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
PDE6CP51160 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PDE6CP51160 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC18.13■□□□□ 0.49
PDE6CP51160 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC18.13■□□□□ 0.49
PDE6CP51160 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC18.13■□□□□ 0.49
PDE6CP51160 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PDE6CP51160 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC18.13■□□□□ 0.49
PDE6CP51160 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC18.13■□□□□ 0.49
PDE6CP51160 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PDE6CP51160 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
PDE6CP51160 IMP4-203ENST00000409935 958 ntTSL 5 BASIC18.13■□□□□ 0.49
PDE6CP51160 RPS15P9-201ENST00000494093 319 ntBASIC18.13■□□□□ 0.49
PDE6CP51160 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC18.13■□□□□ 0.49
PDE6CP51160 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC18.13■□□□□ 0.49
PDE6CP51160 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC18.13■□□□□ 0.49
PDE6CP51160 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC18.13■□□□□ 0.49
PDE6CP51160 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC18.13■□□□□ 0.49
PDE6CP51160 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC18.13■□□□□ 0.49
PDE6CP51160 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC18.13■□□□□ 0.49
PDE6CP51160 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC18.13■□□□□ 0.49
PDE6CP51160 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PDE6CP51160 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
PDE6CP51160 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PDE6CP51160 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC18.13■□□□□ 0.49
PDE6CP51160 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
PDE6CP51160 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PDE6CP51160 AL391256.1-201ENST00000443260 1855 ntBASIC18.13■□□□□ 0.49
PDE6CP51160 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
PDE6CP51160 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
PDE6CP51160 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
PDE6CP51160 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PDE6CP51160 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
PDE6CP51160 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
PDE6CP51160 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC18.13■□□□□ 0.49
PDE6CP51160 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PDE6CP51160 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC18.13■□□□□ 0.49
PDE6CP51160 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
PDE6CP51160 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC18.13■□□□□ 0.49
PDE6CP51160 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC18.13■□□□□ 0.49
PDE6CP51160 AC006504.4-201ENST00000592118 1568 ntBASIC18.13■□□□□ 0.49
PDE6CP51160 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC18.13■□□□□ 0.49
PDE6CP51160 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
PDE6CP51160 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PDE6CP51160 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PDE6CP51160 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC18.12■□□□□ 0.49
PDE6CP51160 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
PDE6CP51160 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
PDE6CP51160 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PDE6CP51160 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PDE6CP51160 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PDE6CP51160 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PDE6CP51160 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
PDE6CP51160 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC18.12■□□□□ 0.49
PDE6CP51160 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
PDE6CP51160 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
PDE6CP51160 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
PDE6CP51160 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC18.12■□□□□ 0.49
PDE6CP51160 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PDE6CP51160 PRSS29P-201ENST00000440800 595 ntBASIC18.12■□□□□ 0.49
PDE6CP51160 PAWRP1-201ENST00000451083 565 ntBASIC18.12■□□□□ 0.49
PDE6CP51160 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
PDE6CP51160 NMU-202ENST00000505262 693 ntTSL 3 BASIC18.12■□□□□ 0.49
PDE6CP51160 IGHV3-65-201ENST00000523210 341 ntBASIC18.12■□□□□ 0.49
PDE6CP51160 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC18.12■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms