Protein–RNA interactions for Protein: P48230

TM4SF4, Transmembrane 4 L6 family member 4, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF4P48230 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TM4SF4P48230 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC18.82■□□□□ 0.6
TM4SF4P48230 AC133539.2-201ENST00000604757 467 ntBASIC18.82■□□□□ 0.6
TM4SF4P48230 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
TM4SF4P48230 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC18.82■□□□□ 0.6
TM4SF4P48230 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC18.82■□□□□ 0.6
TM4SF4P48230 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
TM4SF4P48230 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
TM4SF4P48230 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC18.82■□□□□ 0.6
TM4SF4P48230 AC012317.2-201ENST00000623305 2251 ntBASIC18.82■□□□□ 0.6
TM4SF4P48230 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
TM4SF4P48230 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
TM4SF4P48230 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TM4SF4P48230 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC18.82■□□□□ 0.6
TM4SF4P48230 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
TM4SF4P48230 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TM4SF4P48230 LOX-206ENST00000639739 1626 ntTSL 5 BASIC18.82■□□□□ 0.6
TM4SF4P48230 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC18.81■□□□□ 0.6
TM4SF4P48230 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
TM4SF4P48230 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TM4SF4P48230 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
TM4SF4P48230 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TM4SF4P48230 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC18.81■□□□□ 0.6
TM4SF4P48230 APOA1-205ENST00000375329 927 ntTSL 2 BASIC18.81■□□□□ 0.6
TM4SF4P48230 TDH-203ENST00000531764 1110 ntBASIC18.81■□□□□ 0.6
TM4SF4P48230 AC012322.1-201ENST00000561657 861 ntTSL 3 BASIC18.81■□□□□ 0.6
TM4SF4P48230 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TM4SF4P48230 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TM4SF4P48230 LINC01233-203ENST00000601708 494 ntTSL 3 BASIC18.81■□□□□ 0.6
TM4SF4P48230 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC18.81■□□□□ 0.6
TM4SF4P48230 AL391069.4-201ENST00000609583 481 ntBASIC18.81■□□□□ 0.6
TM4SF4P48230 CU634019.7-201ENST00000624153 1185 ntBASIC18.81■□□□□ 0.6
TM4SF4P48230 FP236241.2-201ENST00000624906 1185 ntBASIC18.81■□□□□ 0.6
TM4SF4P48230 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC18.81■□□□□ 0.6
TM4SF4P48230 AC116353.5-201ENST00000638148 1699 ntBASIC18.81■□□□□ 0.6
TM4SF4P48230 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
TM4SF4P48230 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TM4SF4P48230 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC18.81■□□□□ 0.6
TM4SF4P48230 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TM4SF4P48230 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
TM4SF4P48230 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
TM4SF4P48230 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC18.81■□□□□ 0.6
TM4SF4P48230 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC18.81■□□□□ 0.6
TM4SF4P48230 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TM4SF4P48230 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
TM4SF4P48230 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
TM4SF4P48230 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TM4SF4P48230 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC18.8■□□□□ 0.6
TM4SF4P48230 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TM4SF4P48230 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TM4SF4P48230 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
TM4SF4P48230 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TM4SF4P48230 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TM4SF4P48230 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TM4SF4P48230 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC18.8■□□□□ 0.6
TM4SF4P48230 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
TM4SF4P48230 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC18.8■□□□□ 0.6
TM4SF4P48230 RNA5SP423-201ENST00000517127 109 ntBASIC18.8■□□□□ 0.6
TM4SF4P48230 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC18.8■□□□□ 0.6
TM4SF4P48230 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC18.8■□□□□ 0.6
TM4SF4P48230 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
TM4SF4P48230 PPA1-206ENST00000625364 644 ntTSL 5 BASIC18.8■□□□□ 0.6
TM4SF4P48230 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TM4SF4P48230 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TM4SF4P48230 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
TM4SF4P48230 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
TM4SF4P48230 SNX33P1-201ENST00000592116 1762 ntBASIC18.8■□□□□ 0.6
TM4SF4P48230 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
TM4SF4P48230 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC18.8■□□□□ 0.6
TM4SF4P48230 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC18.8■□□□□ 0.6
TM4SF4P48230 AP000974.1-201ENST00000623909 2387 ntBASIC18.79■□□□□ 0.6
TM4SF4P48230 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
TM4SF4P48230 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
TM4SF4P48230 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TM4SF4P48230 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TM4SF4P48230 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC18.79■□□□□ 0.6
TM4SF4P48230 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
TM4SF4P48230 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC18.79■□□□□ 0.6
TM4SF4P48230 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TM4SF4P48230 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
TM4SF4P48230 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC18.79■□□□□ 0.6
TM4SF4P48230 AL162742.1-201ENST00000434792 954 ntTSL 2 BASIC18.79■□□□□ 0.6
TM4SF4P48230 BCRP2-202ENST00000447763 634 ntBASIC18.79■□□□□ 0.6
TM4SF4P48230 NME4-207ENST00000450036 985 ntTSL 3 BASIC18.79■□□□□ 0.6
TM4SF4P48230 KRT8P13-201ENST00000463294 1010 ntBASIC18.79■□□□□ 0.6
TM4SF4P48230 ZNF527-203ENST00000483919 1142 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
TM4SF4P48230 BCRP6-201ENST00000510112 632 ntBASIC18.79■□□□□ 0.6
TM4SF4P48230 BCRP7-201ENST00000511549 544 ntBASIC18.79■□□□□ 0.6
TM4SF4P48230 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC18.79■□□□□ 0.6
TM4SF4P48230 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC18.79■□□□□ 0.6
TM4SF4P48230 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC18.79■□□□□ 0.6
TM4SF4P48230 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC18.79■□□□□ 0.6
TM4SF4P48230 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
TM4SF4P48230 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC18.79■□□□□ 0.6
TM4SF4P48230 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC18.79■□□□□ 0.6
TM4SF4P48230 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC18.79■□□□□ 0.6
TM4SF4P48230 AC243960.2-201ENST00000600996 747 ntBASIC18.79■□□□□ 0.6
TM4SF4P48230 Z84492.1-201ENST00000606589 408 ntAPPRIS P1 TSL 3 BASIC18.79■□□□□ 0.6
TM4SF4P48230 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TM4SF4P48230 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms