Protein–RNA interactions for Protein: P43699

NKX2-1, Homeobox protein Nkx-2.1, humanhuman

Predicted RBP Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1P43699 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC13.8□□□□□ -0.2
NKX2-1P43699 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
NKX2-1P43699 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
NKX2-1P43699 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
NKX2-1P43699 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
NKX2-1P43699 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
NKX2-1P43699 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
NKX2-1P43699 AC009336.1-201ENST00000608941 1553 ntBASIC13.79□□□□□ -0.2
NKX2-1P43699 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
NKX2-1P43699 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
NKX2-1P43699 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC13.79□□□□□ -0.2
NKX2-1P43699 AC126177.1-201ENST00000547829 2218 ntBASIC13.79□□□□□ -0.2
NKX2-1P43699 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC13.79□□□□□ -0.2
NKX2-1P43699 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC13.79□□□□□ -0.2
NKX2-1P43699 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC13.79□□□□□ -0.2
NKX2-1P43699 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
NKX2-1P43699 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
NKX2-1P43699 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC13.79□□□□□ -0.2
NKX2-1P43699 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC13.79□□□□□ -0.2
NKX2-1P43699 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
NKX2-1P43699 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC13.79□□□□□ -0.2
NKX2-1P43699 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC13.79□□□□□ -0.2
NKX2-1P43699 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC13.79□□□□□ -0.2
NKX2-1P43699 VPS72-207ENST00000640458 689 ntTSL 5 BASIC13.79□□□□□ -0.2
NKX2-1P43699 AL596087.1-201ENST00000400979 1969 ntBASIC13.79□□□□□ -0.2
NKX2-1P43699 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
NKX2-1P43699 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
NKX2-1P43699 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
NKX2-1P43699 LINC01568-207ENST00000641790 1380 ntBASIC13.79□□□□□ -0.2
NKX2-1P43699 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
NKX2-1P43699 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
NKX2-1P43699 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
NKX2-1P43699 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
NKX2-1P43699 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC13.79□□□□□ -0.2
NKX2-1P43699 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
NKX2-1P43699 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC13.79□□□□□ -0.2
NKX2-1P43699 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
NKX2-1P43699 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
NKX2-1P43699 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
NKX2-1P43699 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
NKX2-1P43699 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC13.78□□□□□ -0.2
NKX2-1P43699 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
NKX2-1P43699 AC092850.2-201ENST00000623821 2697 ntBASIC13.78□□□□□ -0.2
NKX2-1P43699 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
NKX2-1P43699 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC13.78□□□□□ -0.2
NKX2-1P43699 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
NKX2-1P43699 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC13.78□□□□□ -0.2
NKX2-1P43699 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
NKX2-1P43699 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
NKX2-1P43699 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
NKX2-1P43699 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
NKX2-1P43699 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
NKX2-1P43699 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
NKX2-1P43699 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC13.78□□□□□ -0.2
NKX2-1P43699 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
NKX2-1P43699 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
NKX2-1P43699 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
NKX2-1P43699 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC13.78□□□□□ -0.2
NKX2-1P43699 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC13.78□□□□□ -0.2
NKX2-1P43699 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC13.78□□□□□ -0.2
NKX2-1P43699 AL023973.1-201ENST00000624619 620 ntBASIC13.78□□□□□ -0.2
NKX2-1P43699 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC13.78□□□□□ -0.2
NKX2-1P43699 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC13.78□□□□□ -0.2
NKX2-1P43699 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
NKX2-1P43699 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
NKX2-1P43699 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
NKX2-1P43699 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
NKX2-1P43699 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
NKX2-1P43699 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
NKX2-1P43699 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
NKX2-1P43699 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
NKX2-1P43699 LINC00895-201ENST00000629028 1637 ntBASIC13.78□□□□□ -0.2
NKX2-1P43699 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC13.78□□□□□ -0.2
NKX2-1P43699 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
NKX2-1P43699 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
NKX2-1P43699 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
NKX2-1P43699 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
NKX2-1P43699 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
NKX2-1P43699 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC13.78□□□□□ -0.2
NKX2-1P43699 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC13.78□□□□□ -0.2
NKX2-1P43699 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
NKX2-1P43699 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
NKX2-1P43699 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
NKX2-1P43699 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
NKX2-1P43699 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
NKX2-1P43699 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC13.78□□□□□ -0.2
NKX2-1P43699 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
NKX2-1P43699 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
NKX2-1P43699 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC13.78□□□□□ -0.2
NKX2-1P43699 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
NKX2-1P43699 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
NKX2-1P43699 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
NKX2-1P43699 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
NKX2-1P43699 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
NKX2-1P43699 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
NKX2-1P43699 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC13.77□□□□□ -0.2
NKX2-1P43699 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.2
NKX2-1P43699 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.2
NKX2-1P43699 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.2
NKX2-1P43699 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms