Protein–RNA interactions for Protein: P43354

NR4A2, Nuclear receptor subfamily 4 group A member 2, humanhuman

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A2P43354 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
NR4A2P43354 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
NR4A2P43354 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
NR4A2P43354 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
NR4A2P43354 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
NR4A2P43354 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
NR4A2P43354 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC15.32■□□□□ 0.04
NR4A2P43354 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC15.32■□□□□ 0.04
NR4A2P43354 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
NR4A2P43354 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC15.32■□□□□ 0.04
NR4A2P43354 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC15.31■□□□□ 0.04
NR4A2P43354 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
NR4A2P43354 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
NR4A2P43354 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
NR4A2P43354 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
NR4A2P43354 AL009178.2-201ENST00000597278 2719 ntBASIC15.31■□□□□ 0.04
NR4A2P43354 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC15.31■□□□□ 0.04
NR4A2P43354 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
NR4A2P43354 C8orf49-201ENST00000525043 1968 ntBASIC15.31■□□□□ 0.04
NR4A2P43354 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
NR4A2P43354 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
NR4A2P43354 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
NR4A2P43354 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
NR4A2P43354 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
NR4A2P43354 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
NR4A2P43354 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
NR4A2P43354 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
NR4A2P43354 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
NR4A2P43354 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
NR4A2P43354 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
NR4A2P43354 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
NR4A2P43354 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC15.31■□□□□ 0.04
NR4A2P43354 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
NR4A2P43354 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC15.31■□□□□ 0.04
NR4A2P43354 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC15.31■□□□□ 0.04
NR4A2P43354 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC15.31■□□□□ 0.04
NR4A2P43354 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
NR4A2P43354 ABR-204ENST00000543210 1049 ntTSL 2 BASIC15.31■□□□□ 0.04
NR4A2P43354 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC15.31■□□□□ 0.04
NR4A2P43354 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC15.31■□□□□ 0.04
NR4A2P43354 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
NR4A2P43354 ABR-217ENST00000572441 563 ntTSL 4 BASIC15.31■□□□□ 0.04
NR4A2P43354 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC15.31■□□□□ 0.04
NR4A2P43354 AC011840.4-201ENST00000578471 627 ntBASIC15.31■□□□□ 0.04
NR4A2P43354 AL353801.3-201ENST00000609898 542 ntBASIC15.31■□□□□ 0.04
NR4A2P43354 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
NR4A2P43354 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC15.31■□□□□ 0.04
NR4A2P43354 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
NR4A2P43354 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC15.31■□□□□ 0.04
NR4A2P43354 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC15.31■□□□□ 0.04
NR4A2P43354 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC15.31■□□□□ 0.04
NR4A2P43354 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
NR4A2P43354 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
NR4A2P43354 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
NR4A2P43354 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
NR4A2P43354 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
NR4A2P43354 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
NR4A2P43354 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
NR4A2P43354 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC15.31■□□□□ 0.04
NR4A2P43354 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
NR4A2P43354 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC15.31■□□□□ 0.04
NR4A2P43354 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
NR4A2P43354 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
NR4A2P43354 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
NR4A2P43354 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
NR4A2P43354 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
NR4A2P43354 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
NR4A2P43354 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC15.31■□□□□ 0.04
NR4A2P43354 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC15.31■□□□□ 0.04
NR4A2P43354 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC15.3■□□□□ 0.04
NR4A2P43354 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
NR4A2P43354 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
NR4A2P43354 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
NR4A2P43354 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
NR4A2P43354 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
NR4A2P43354 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
NR4A2P43354 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
NR4A2P43354 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC15.3■□□□□ 0.04
NR4A2P43354 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
NR4A2P43354 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
NR4A2P43354 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC15.3■□□□□ 0.04
NR4A2P43354 NSUN5P1-202ENST00000421140 1535 ntBASIC15.3■□□□□ 0.04
NR4A2P43354 RHBDF1P1-201ENST00000427504 1941 ntBASIC15.3■□□□□ 0.04
NR4A2P43354 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC15.3■□□□□ 0.04
NR4A2P43354 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC15.3■□□□□ 0.04
NR4A2P43354 NSUN5P2-203ENST00000457352 1529 ntBASIC15.3■□□□□ 0.04
NR4A2P43354 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
NR4A2P43354 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC15.3■□□□□ 0.04
NR4A2P43354 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC15.3■□□□□ 0.04
NR4A2P43354 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
NR4A2P43354 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC15.3■□□□□ 0.04
NR4A2P43354 FICD-205ENST00000552758 603 ntTSL 2 BASIC15.3■□□□□ 0.04
NR4A2P43354 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC15.3■□□□□ 0.04
NR4A2P43354 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC15.3■□□□□ 0.04
NR4A2P43354 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC15.3■□□□□ 0.04
NR4A2P43354 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
NR4A2P43354 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
NR4A2P43354 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC15.3■□□□□ 0.04
NR4A2P43354 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
NR4A2P43354 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 49.6 ms