Protein–RNA interactions for Protein: P42261

GRIA1, Glutamate receptor 1, humanhuman

Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRIA1P42261 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
GRIA1P42261 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
GRIA1P42261 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC17.01■□□□□ 0.31
GRIA1P42261 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
GRIA1P42261 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
GRIA1P42261 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
GRIA1P42261 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
GRIA1P42261 AC131009.4-201ENST00000624048 1740 ntBASIC17.01■□□□□ 0.31
GRIA1P42261 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
GRIA1P42261 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
GRIA1P42261 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
GRIA1P42261 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
GRIA1P42261 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
GRIA1P42261 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC17■□□□□ 0.31
GRIA1P42261 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC17■□□□□ 0.31
GRIA1P42261 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC17■□□□□ 0.31
GRIA1P42261 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
GRIA1P42261 AL031731.1-201ENST00000642131 2094 ntBASIC17■□□□□ 0.31
GRIA1P42261 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
GRIA1P42261 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC17■□□□□ 0.31
GRIA1P42261 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
GRIA1P42261 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
GRIA1P42261 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
GRIA1P42261 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC17■□□□□ 0.31
GRIA1P42261 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
GRIA1P42261 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC17■□□□□ 0.31
GRIA1P42261 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
GRIA1P42261 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC17■□□□□ 0.31
GRIA1P42261 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC17■□□□□ 0.31
GRIA1P42261 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC17■□□□□ 0.31
GRIA1P42261 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC17■□□□□ 0.31
GRIA1P42261 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
GRIA1P42261 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC17■□□□□ 0.31
GRIA1P42261 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC17■□□□□ 0.31
GRIA1P42261 GGT4P-201ENST00000623672 1708 ntBASIC17■□□□□ 0.31
GRIA1P42261 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
GRIA1P42261 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC17■□□□□ 0.31
GRIA1P42261 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
GRIA1P42261 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
GRIA1P42261 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
GRIA1P42261 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC17■□□□□ 0.31
GRIA1P42261 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
GRIA1P42261 GGT3P-204ENST00000453783 1664 ntBASIC17■□□□□ 0.31
GRIA1P42261 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC17■□□□□ 0.31
GRIA1P42261 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
GRIA1P42261 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
GRIA1P42261 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
GRIA1P42261 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC17■□□□□ 0.31
GRIA1P42261 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
GRIA1P42261 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC17■□□□□ 0.31
GRIA1P42261 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
GRIA1P42261 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC16.99■□□□□ 0.31
GRIA1P42261 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC16.99■□□□□ 0.31
GRIA1P42261 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC16.99■□□□□ 0.31
GRIA1P42261 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC16.99■□□□□ 0.31
GRIA1P42261 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
GRIA1P42261 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
GRIA1P42261 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
GRIA1P42261 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
GRIA1P42261 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
GRIA1P42261 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC16.99■□□□□ 0.31
GRIA1P42261 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
GRIA1P42261 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
GRIA1P42261 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
GRIA1P42261 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC16.99■□□□□ 0.31
GRIA1P42261 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC16.99■□□□□ 0.31
GRIA1P42261 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC16.99■□□□□ 0.31
GRIA1P42261 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
GRIA1P42261 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC16.99■□□□□ 0.31
GRIA1P42261 AC136632.2-201ENST00000512891 861 ntBASIC16.99■□□□□ 0.31
GRIA1P42261 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC16.99■□□□□ 0.31
GRIA1P42261 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC16.99■□□□□ 0.31
GRIA1P42261 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC16.99■□□□□ 0.31
GRIA1P42261 AC008735.5-201ENST00000623544 497 ntBASIC16.99■□□□□ 0.31
GRIA1P42261 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC16.99■□□□□ 0.31
GRIA1P42261 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC16.99■□□□□ 0.31
GRIA1P42261 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
GRIA1P42261 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC16.99■□□□□ 0.31
GRIA1P42261 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
GRIA1P42261 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC16.99■□□□□ 0.31
GRIA1P42261 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
GRIA1P42261 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
GRIA1P42261 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
GRIA1P42261 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
GRIA1P42261 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
GRIA1P42261 AC132872.4-202ENST00000622924 2756 ntBASIC16.99■□□□□ 0.31
GRIA1P42261 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
GRIA1P42261 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC16.98■□□□□ 0.31
GRIA1P42261 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
GRIA1P42261 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
GRIA1P42261 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC16.98■□□□□ 0.31
GRIA1P42261 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
GRIA1P42261 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC16.98■□□□□ 0.31
GRIA1P42261 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
GRIA1P42261 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC16.98■□□□□ 0.31
GRIA1P42261 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
GRIA1P42261 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
GRIA1P42261 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
GRIA1P42261 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
GRIA1P42261 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC16.98■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms