Protein–RNA interactions for Protein: P40198

CEACAM3, Carcinoembryonic antigen-related cell adhesion molecule 3, humanhuman

Predictions only

Length 252 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM3P40198 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC13.71□□□□□ -0.21
CEACAM3P40198 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC13.71□□□□□ -0.21
CEACAM3P40198 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CEACAM3P40198 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC13.71□□□□□ -0.21
CEACAM3P40198 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
CEACAM3P40198 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CEACAM3P40198 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
CEACAM3P40198 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC13.71□□□□□ -0.21
CEACAM3P40198 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
CEACAM3P40198 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC13.71□□□□□ -0.21
CEACAM3P40198 HS6ST1P1-201ENST00000481504 1234 ntBASIC13.71□□□□□ -0.21
CEACAM3P40198 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC13.71□□□□□ -0.21
CEACAM3P40198 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC13.71□□□□□ -0.21
CEACAM3P40198 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC13.71□□□□□ -0.21
CEACAM3P40198 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC13.71□□□□□ -0.21
CEACAM3P40198 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC13.71□□□□□ -0.21
CEACAM3P40198 AC027601.4-201ENST00000611259 610 ntBASIC13.71□□□□□ -0.21
CEACAM3P40198 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CEACAM3P40198 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
CEACAM3P40198 AC007064.4-201ENST00000637740 555 ntBASIC13.71□□□□□ -0.21
CEACAM3P40198 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
CEACAM3P40198 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CEACAM3P40198 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC13.71□□□□□ -0.21
CEACAM3P40198 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
CEACAM3P40198 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC13.71□□□□□ -0.21
CEACAM3P40198 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
CEACAM3P40198 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
CEACAM3P40198 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC13.71□□□□□ -0.21
CEACAM3P40198 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CEACAM3P40198 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC13.71□□□□□ -0.22
CEACAM3P40198 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC13.71□□□□□ -0.22
CEACAM3P40198 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC13.71□□□□□ -0.22
CEACAM3P40198 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
CEACAM3P40198 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
CEACAM3P40198 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC13.71□□□□□ -0.22
CEACAM3P40198 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
CEACAM3P40198 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.22
CEACAM3P40198 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC13.71□□□□□ -0.22
CEACAM3P40198 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
CEACAM3P40198 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
CEACAM3P40198 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CEACAM3P40198 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC13.7□□□□□ -0.22
CEACAM3P40198 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
CEACAM3P40198 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC13.7□□□□□ -0.22
CEACAM3P40198 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CEACAM3P40198 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC13.7□□□□□ -0.22
CEACAM3P40198 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
CEACAM3P40198 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CEACAM3P40198 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
CEACAM3P40198 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CEACAM3P40198 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
CEACAM3P40198 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC13.7□□□□□ -0.22
CEACAM3P40198 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
CEACAM3P40198 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CEACAM3P40198 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CEACAM3P40198 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
CEACAM3P40198 STARD13-205ENST00000439831 945 ntTSL 2 BASIC13.7□□□□□ -0.22
CEACAM3P40198 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
CEACAM3P40198 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CEACAM3P40198 AC106730.1-201ENST00000566722 1090 ntBASIC13.7□□□□□ -0.22
CEACAM3P40198 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC13.7□□□□□ -0.22
CEACAM3P40198 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
CEACAM3P40198 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC13.7□□□□□ -0.22
CEACAM3P40198 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC13.7□□□□□ -0.22
CEACAM3P40198 REXO1L3P-201ENST00000622202 1288 ntBASIC13.7□□□□□ -0.22
CEACAM3P40198 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
CEACAM3P40198 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC13.7□□□□□ -0.22
CEACAM3P40198 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CEACAM3P40198 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
CEACAM3P40198 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
CEACAM3P40198 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CEACAM3P40198 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC13.7□□□□□ -0.22
CEACAM3P40198 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CEACAM3P40198 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC13.7□□□□□ -0.22
CEACAM3P40198 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
CEACAM3P40198 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CEACAM3P40198 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC13.7□□□□□ -0.22
CEACAM3P40198 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CEACAM3P40198 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
CEACAM3P40198 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CEACAM3P40198 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
CEACAM3P40198 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CEACAM3P40198 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CEACAM3P40198 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
CEACAM3P40198 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CEACAM3P40198 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC13.69□□□□□ -0.22
CEACAM3P40198 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC13.69□□□□□ -0.22
CEACAM3P40198 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CEACAM3P40198 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
CEACAM3P40198 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
CEACAM3P40198 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CEACAM3P40198 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CEACAM3P40198 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CEACAM3P40198 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CEACAM3P40198 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CEACAM3P40198 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CEACAM3P40198 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CEACAM3P40198 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
CEACAM3P40198 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
CEACAM3P40198 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms