Protein–RNA interactions for Protein: P31327

CPS1, Carbamoyl-phosphate synthase [ammonia], mitochondrial, humanhuman

Predictions only

Length 1,500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1P31327 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC23.28■■□□□ 1.32
CPS1P31327 YIF1A-210ENST00000496746 667 ntTSL 2 BASIC23.28■■□□□ 1.32
CPS1P31327 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
CPS1P31327 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC23.28■■□□□ 1.32
CPS1P31327 AC013467.2-201ENST00000605472 835 ntBASIC23.28■■□□□ 1.32
CPS1P31327 AL021578.1-201ENST00000613646 709 ntBASIC23.28■■□□□ 1.32
CPS1P31327 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC23.28■■□□□ 1.32
CPS1P31327 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC23.28■■□□□ 1.32
CPS1P31327 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
CPS1P31327 BOC-212ENST00000485230 2173 ntTSL 2 BASIC23.28■■□□□ 1.32
CPS1P31327 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC23.27■■□□□ 1.32
CPS1P31327 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC23.27■■□□□ 1.32
CPS1P31327 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
CPS1P31327 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC23.27■■□□□ 1.32
CPS1P31327 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC23.27■■□□□ 1.32
CPS1P31327 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC23.27■■□□□ 1.32
CPS1P31327 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC23.27■■□□□ 1.32
CPS1P31327 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC23.27■■□□□ 1.32
CPS1P31327 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC23.27■■□□□ 1.32
CPS1P31327 HIST1H2AJ-201ENST00000333151 387 ntAPPRIS P1 BASIC23.27■■□□□ 1.32
CPS1P31327 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC23.27■■□□□ 1.32
CPS1P31327 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC23.27■■□□□ 1.32
CPS1P31327 KRT8P13-201ENST00000463294 1010 ntBASIC23.27■■□□□ 1.32
CPS1P31327 BTNL8-205ENST00000505126 1294 ntTSL 2 BASIC23.27■■□□□ 1.32
CPS1P31327 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC23.27■■□□□ 1.32
CPS1P31327 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC23.27■■□□□ 1.32
CPS1P31327 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC23.27■■□□□ 1.32
CPS1P31327 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC23.27■■□□□ 1.32
CPS1P31327 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
CPS1P31327 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
CPS1P31327 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC23.27■■□□□ 1.31
CPS1P31327 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC23.26■■□□□ 1.31
CPS1P31327 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC23.26■■□□□ 1.31
CPS1P31327 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC23.26■■□□□ 1.31
CPS1P31327 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC23.26■■□□□ 1.31
CPS1P31327 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC23.26■■□□□ 1.31
CPS1P31327 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
CPS1P31327 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
CPS1P31327 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
CPS1P31327 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC23.26■■□□□ 1.31
CPS1P31327 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC23.26■■□□□ 1.31
CPS1P31327 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC23.26■■□□□ 1.31
CPS1P31327 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC23.26■■□□□ 1.31
CPS1P31327 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
CPS1P31327 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
CPS1P31327 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
CPS1P31327 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
CPS1P31327 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC23.26■■□□□ 1.31
CPS1P31327 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC23.26■■□□□ 1.31
CPS1P31327 FCGR1B-203ENST00000369384 1044 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
CPS1P31327 AGER-203ENST00000375065 665 ntTSL 2 BASIC23.26■■□□□ 1.31
CPS1P31327 SLC25A24P2-201ENST00000415059 510 ntBASIC23.26■■□□□ 1.31
CPS1P31327 CALR4P-201ENST00000431943 946 ntBASIC23.26■■□□□ 1.31
CPS1P31327 WDR53-204ENST00000433160 887 ntTSL 5 BASIC23.26■■□□□ 1.31
CPS1P31327 TNFRSF14-AS1-206ENST00000452793 569 ntTSL 3 BASIC23.26■■□□□ 1.31
CPS1P31327 APOPT1-207ENST00000477116 906 ntTSL 3 BASIC23.26■■□□□ 1.31
CPS1P31327 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC23.26■■□□□ 1.31
CPS1P31327 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC23.26■■□□□ 1.31
CPS1P31327 RIT1-205ENST00000539040 919 ntTSL 2 BASIC23.26■■□□□ 1.31
CPS1P31327 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC23.26■■□□□ 1.31
CPS1P31327 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC23.26■■□□□ 1.31
CPS1P31327 AC015967.2-201ENST00000624092 234 ntBASIC23.26■■□□□ 1.31
CPS1P31327 AC006435.4-201ENST00000625037 234 ntBASIC23.26■■□□□ 1.31
CPS1P31327 AL356737.1-201ENST00000634391 234 ntBASIC23.26■■□□□ 1.31
CPS1P31327 GOLGA2P9-201ENST00000596977 1937 ntBASIC23.26■■□□□ 1.31
CPS1P31327 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
CPS1P31327 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
CPS1P31327 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
CPS1P31327 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC23.26■■□□□ 1.31
CPS1P31327 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC23.26■■□□□ 1.31
CPS1P31327 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC23.25■■□□□ 1.31
CPS1P31327 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC23.25■■□□□ 1.31
CPS1P31327 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC23.25■■□□□ 1.31
CPS1P31327 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC23.25■■□□□ 1.31
CPS1P31327 SNX33P1-201ENST00000592116 1762 ntBASIC23.25■■□□□ 1.31
CPS1P31327 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC23.25■■□□□ 1.31
CPS1P31327 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
CPS1P31327 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC23.25■■□□□ 1.31
CPS1P31327 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
CPS1P31327 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC23.25■■□□□ 1.31
CPS1P31327 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC23.25■■□□□ 1.31
CPS1P31327 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC23.25■■□□□ 1.31
CPS1P31327 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC23.25■■□□□ 1.31
CPS1P31327 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC23.25■■□□□ 1.31
CPS1P31327 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC23.25■■□□□ 1.31
CPS1P31327 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
CPS1P31327 LINC01278-203ENST00000608788 820 ntTSL 5 BASIC23.25■■□□□ 1.31
CPS1P31327 LINC01278-207ENST00000610234 555 ntTSL 4 BASIC23.25■■□□□ 1.31
CPS1P31327 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
CPS1P31327 MAPK14-204ENST00000468133 1376 ntTSL 2 BASIC23.25■■□□□ 1.31
CPS1P31327 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC23.25■■□□□ 1.31
CPS1P31327 CLK3P2-201ENST00000427566 1453 ntBASIC23.25■■□□□ 1.31
CPS1P31327 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC23.25■■□□□ 1.31
CPS1P31327 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
CPS1P31327 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
CPS1P31327 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
CPS1P31327 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
CPS1P31327 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
CPS1P31327 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC23.25■■□□□ 1.31
CPS1P31327 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC23.25■■□□□ 1.31
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms