Protein–RNA interactions for Protein: P27539

GDF1, Embryonic growth/differentiation factor 1, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDF1P27539 SLC9A3P2-201ENST00000447821 2021 ntBASIC15.19■□□□□ 0.02
GDF1P27539 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC15.19■□□□□ 0.02
GDF1P27539 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
GDF1P27539 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
GDF1P27539 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
GDF1P27539 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
GDF1P27539 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
GDF1P27539 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
GDF1P27539 STOM-202ENST00000347359 870 ntTSL 2 BASIC15.19■□□□□ 0.02
GDF1P27539 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
GDF1P27539 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
GDF1P27539 TFAMP1-201ENST00000412727 736 ntBASIC15.19■□□□□ 0.02
GDF1P27539 ADH5P3-201ENST00000433842 1137 ntBASIC15.19■□□□□ 0.02
GDF1P27539 METTL21AP1-201ENST00000438852 635 ntBASIC15.19■□□□□ 0.02
GDF1P27539 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC15.19■□□□□ 0.02
GDF1P27539 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC15.19■□□□□ 0.02
GDF1P27539 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC15.19■□□□□ 0.02
GDF1P27539 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
GDF1P27539 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC15.19■□□□□ 0.02
GDF1P27539 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC15.19■□□□□ 0.02
GDF1P27539 MIR4492-201ENST00000581627 80 ntBASIC15.19■□□□□ 0.02
GDF1P27539 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC15.19■□□□□ 0.02
GDF1P27539 AL513210.1-201ENST00000629608 234 ntBASIC15.19■□□□□ 0.02
GDF1P27539 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC15.19■□□□□ 0.02
GDF1P27539 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
GDF1P27539 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC15.19■□□□□ 0.02
GDF1P27539 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
GDF1P27539 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
GDF1P27539 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
GDF1P27539 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
GDF1P27539 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC15.18■□□□□ 0.02
GDF1P27539 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
GDF1P27539 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC15.18■□□□□ 0.02
GDF1P27539 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
GDF1P27539 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
GDF1P27539 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC15.18■□□□□ 0.02
GDF1P27539 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC15.18■□□□□ 0.02
GDF1P27539 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
GDF1P27539 PCDHB17P-201ENST00000539533 2393 ntBASIC15.18■□□□□ 0.02
GDF1P27539 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC15.18■□□□□ 0.02
GDF1P27539 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
GDF1P27539 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC15.18■□□□□ 0.02
GDF1P27539 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC15.18■□□□□ 0.02
GDF1P27539 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
GDF1P27539 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
GDF1P27539 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
GDF1P27539 LBH-203ENST00000404397 543 ntTSL 4 BASIC15.18■□□□□ 0.02
GDF1P27539 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC15.18■□□□□ 0.02
GDF1P27539 AC004461.1-201ENST00000412461 403 ntBASIC15.18■□□□□ 0.02
GDF1P27539 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC15.18■□□□□ 0.02
GDF1P27539 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
GDF1P27539 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC15.18■□□□□ 0.02
GDF1P27539 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC15.18■□□□□ 0.02
GDF1P27539 AP002490.2-201ENST00000524791 560 ntBASIC15.18■□□□□ 0.02
GDF1P27539 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
GDF1P27539 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
GDF1P27539 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC15.18■□□□□ 0.02
GDF1P27539 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
GDF1P27539 MIR3909-201ENST00000579518 119 ntBASIC15.18■□□□□ 0.02
GDF1P27539 AC022145.2-201ENST00000598203 171 ntBASIC15.18■□□□□ 0.02
GDF1P27539 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
GDF1P27539 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
GDF1P27539 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC15.18■□□□□ 0.02
GDF1P27539 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC15.18■□□□□ 0.02
GDF1P27539 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC15.18■□□□□ 0.02
GDF1P27539 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC15.18■□□□□ 0.02
GDF1P27539 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC15.18■□□□□ 0.02
GDF1P27539 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC15.18■□□□□ 0.02
GDF1P27539 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
GDF1P27539 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
GDF1P27539 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
GDF1P27539 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC15.17■□□□□ 0.02
GDF1P27539 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC15.17■□□□□ 0.02
GDF1P27539 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
GDF1P27539 KRT18P28-201ENST00000453838 1332 ntBASIC15.17■□□□□ 0.02
GDF1P27539 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
GDF1P27539 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC15.17■□□□□ 0.02
GDF1P27539 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
GDF1P27539 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
GDF1P27539 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
GDF1P27539 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC15.17■□□□□ 0.02
GDF1P27539 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC15.17■□□□□ 0.02
GDF1P27539 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC15.17■□□□□ 0.02
GDF1P27539 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC15.17■□□□□ 0.02
GDF1P27539 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC15.17■□□□□ 0.02
GDF1P27539 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC15.17■□□□□ 0.02
GDF1P27539 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
GDF1P27539 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
GDF1P27539 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
GDF1P27539 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
GDF1P27539 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
GDF1P27539 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
GDF1P27539 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
GDF1P27539 PMS2P2-201ENST00000425039 1128 ntBASIC15.17■□□□□ 0.02
GDF1P27539 WDR53-204ENST00000433160 887 ntTSL 5 BASIC15.17■□□□□ 0.02
GDF1P27539 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC15.17■□□□□ 0.02
GDF1P27539 KRT8P48-201ENST00000515599 1220 ntBASIC15.17■□□□□ 0.02
GDF1P27539 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
GDF1P27539 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC15.17■□□□□ 0.02
GDF1P27539 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC15.17■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms