Protein–RNA interactions for Protein: P23763

VAMP1, Vesicle-associated membrane protein 1, humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1P23763 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC14.22□□□□□ -0.13
VAMP1P23763 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
VAMP1P23763 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC14.22□□□□□ -0.13
VAMP1P23763 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
VAMP1P23763 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC14.22□□□□□ -0.13
VAMP1P23763 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
VAMP1P23763 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
VAMP1P23763 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC14.22□□□□□ -0.13
VAMP1P23763 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
VAMP1P23763 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
VAMP1P23763 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
VAMP1P23763 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
VAMP1P23763 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
VAMP1P23763 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
VAMP1P23763 UNC13A-202ENST00000519716 9838 ntAPPRIS P2 TSL 5 BASIC14.21□□□□□ -0.13
VAMP1P23763 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
VAMP1P23763 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
VAMP1P23763 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
VAMP1P23763 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
VAMP1P23763 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
VAMP1P23763 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
VAMP1P23763 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC14.21□□□□□ -0.13
VAMP1P23763 GPR89P-201ENST00000407924 1495 ntBASIC14.21□□□□□ -0.13
VAMP1P23763 VWF-201ENST00000261405 8838 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
VAMP1P23763 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
VAMP1P23763 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC14.21□□□□□ -0.13
VAMP1P23763 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC14.21□□□□□ -0.13
VAMP1P23763 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
VAMP1P23763 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
VAMP1P23763 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
VAMP1P23763 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC14.21□□□□□ -0.13
VAMP1P23763 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
VAMP1P23763 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC14.21□□□□□ -0.13
VAMP1P23763 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC14.21□□□□□ -0.13
VAMP1P23763 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC14.21□□□□□ -0.13
VAMP1P23763 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC14.21□□□□□ -0.13
VAMP1P23763 AP000525.1-201ENST00000608286 694 ntBASIC14.21□□□□□ -0.13
VAMP1P23763 PID1-202ENST00000392054 2745 ntTSL 2 BASIC14.21□□□□□ -0.13
VAMP1P23763 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC14.21□□□□□ -0.13
VAMP1P23763 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
VAMP1P23763 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
VAMP1P23763 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
VAMP1P23763 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC14.21□□□□□ -0.13
VAMP1P23763 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
VAMP1P23763 SIDT1-201ENST00000264852 5080 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.14
VAMP1P23763 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.14
VAMP1P23763 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
VAMP1P23763 AC010460.3-201ENST00000511359 1579 ntBASIC14.21□□□□□ -0.14
VAMP1P23763 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
VAMP1P23763 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC14.21□□□□□ -0.14
VAMP1P23763 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
VAMP1P23763 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC14.21□□□□□ -0.14
VAMP1P23763 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC14.21□□□□□ -0.14
VAMP1P23763 OSBPL3-201ENST00000313367 6760 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
VAMP1P23763 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
VAMP1P23763 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC14.2□□□□□ -0.14
VAMP1P23763 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC14.2□□□□□ -0.14
VAMP1P23763 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
VAMP1P23763 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
VAMP1P23763 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC14.2□□□□□ -0.14
VAMP1P23763 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
VAMP1P23763 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
VAMP1P23763 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
VAMP1P23763 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
VAMP1P23763 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
VAMP1P23763 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
VAMP1P23763 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
VAMP1P23763 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC14.2□□□□□ -0.14
VAMP1P23763 AP000523.1-201ENST00000398242 1049 ntBASIC14.2□□□□□ -0.14
VAMP1P23763 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
VAMP1P23763 AC012618.2-201ENST00000428058 849 ntBASIC14.2□□□□□ -0.14
VAMP1P23763 KRT18P48-201ENST00000434763 852 ntBASIC14.2□□□□□ -0.14
VAMP1P23763 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC14.2□□□□□ -0.14
VAMP1P23763 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC14.2□□□□□ -0.14
VAMP1P23763 AC034232.1-201ENST00000506026 1064 ntBASIC14.2□□□□□ -0.14
VAMP1P23763 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC14.2□□□□□ -0.14
VAMP1P23763 AC090192.1-201ENST00000517740 490 ntBASIC14.2□□□□□ -0.14
VAMP1P23763 EMC9-206ENST00000560403 872 ntTSL 2 BASIC14.2□□□□□ -0.14
VAMP1P23763 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC14.2□□□□□ -0.14
VAMP1P23763 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC14.2□□□□□ -0.14
VAMP1P23763 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC14.2□□□□□ -0.14
VAMP1P23763 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
VAMP1P23763 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
VAMP1P23763 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
VAMP1P23763 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
VAMP1P23763 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
VAMP1P23763 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
VAMP1P23763 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC14.2□□□□□ -0.14
VAMP1P23763 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC14.2□□□□□ -0.14
VAMP1P23763 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
VAMP1P23763 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC14.19□□□□□ -0.14
VAMP1P23763 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
VAMP1P23763 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
VAMP1P23763 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC14.19□□□□□ -0.14
VAMP1P23763 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
VAMP1P23763 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC14.19□□□□□ -0.14
VAMP1P23763 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
VAMP1P23763 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC14.19□□□□□ -0.14
VAMP1P23763 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
VAMP1P23763 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms