Protein–RNA interactions for Protein: P19013

KRT4, Keratin, type II cytoskeletal 4, humanhuman

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT4P19013 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
KRT4P19013 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC16.88■□□□□ 0.29
KRT4P19013 AP002414.1-201ENST00000391405 1147 ntBASIC16.88■□□□□ 0.29
KRT4P19013 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC16.88■□□□□ 0.29
KRT4P19013 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC16.88■□□□□ 0.29
KRT4P19013 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC16.88■□□□□ 0.29
KRT4P19013 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
KRT4P19013 SLC9A7P1-201ENST00000554295 3311 ntBASIC16.88■□□□□ 0.29
KRT4P19013 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC16.88■□□□□ 0.29
KRT4P19013 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC16.88■□□□□ 0.29
KRT4P19013 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC16.88■□□□□ 0.29
KRT4P19013 AL603832.2-201ENST00000566195 2125 ntBASIC16.88■□□□□ 0.29
KRT4P19013 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
KRT4P19013 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC16.88■□□□□ 0.29
KRT4P19013 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC16.88■□□□□ 0.29
KRT4P19013 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
KRT4P19013 AC006277.1-201ENST00000624348 1610 ntBASIC16.88■□□□□ 0.29
KRT4P19013 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
KRT4P19013 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
KRT4P19013 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
KRT4P19013 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
KRT4P19013 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
KRT4P19013 KRT8P49-201ENST00000604166 1432 ntBASIC16.87■□□□□ 0.29
KRT4P19013 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
KRT4P19013 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC16.87■□□□□ 0.29
KRT4P19013 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
KRT4P19013 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
KRT4P19013 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
KRT4P19013 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
KRT4P19013 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
KRT4P19013 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
KRT4P19013 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC16.87■□□□□ 0.29
KRT4P19013 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
KRT4P19013 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
KRT4P19013 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC16.87■□□□□ 0.29
KRT4P19013 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
KRT4P19013 PMPCAP1-201ENST00000508114 1576 ntBASIC16.87■□□□□ 0.29
KRT4P19013 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC16.87■□□□□ 0.29
KRT4P19013 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
KRT4P19013 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC16.87■□□□□ 0.29
KRT4P19013 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
KRT4P19013 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
KRT4P19013 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC16.87■□□□□ 0.29
KRT4P19013 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
KRT4P19013 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
KRT4P19013 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
KRT4P19013 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
KRT4P19013 SIGLEC30P-201ENST00000455569 941 ntBASIC16.87■□□□□ 0.29
KRT4P19013 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC16.87■□□□□ 0.29
KRT4P19013 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC16.87■□□□□ 0.29
KRT4P19013 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC16.87■□□□□ 0.29
KRT4P19013 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC16.87■□□□□ 0.29
KRT4P19013 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC16.87■□□□□ 0.29
KRT4P19013 AL139011.1-202ENST00000642063 584 ntBASIC16.87■□□□□ 0.29
KRT4P19013 AC092384.3-202ENST00000564646 2873 ntBASIC16.87■□□□□ 0.29
KRT4P19013 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
KRT4P19013 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
KRT4P19013 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
KRT4P19013 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
KRT4P19013 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
KRT4P19013 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC16.87■□□□□ 0.29
KRT4P19013 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC16.87■□□□□ 0.29
KRT4P19013 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
KRT4P19013 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
KRT4P19013 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
KRT4P19013 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
KRT4P19013 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
KRT4P19013 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
KRT4P19013 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC16.87■□□□□ 0.29
KRT4P19013 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
KRT4P19013 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
KRT4P19013 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC16.87■□□□□ 0.29
KRT4P19013 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
KRT4P19013 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC16.86■□□□□ 0.29
KRT4P19013 TP73-AS1-210ENST00000637775 1455 ntBASIC16.86■□□□□ 0.29
KRT4P19013 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
KRT4P19013 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
KRT4P19013 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
KRT4P19013 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC16.86■□□□□ 0.29
KRT4P19013 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
KRT4P19013 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC16.86■□□□□ 0.29
KRT4P19013 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
KRT4P19013 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
KRT4P19013 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
KRT4P19013 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC16.86■□□□□ 0.29
KRT4P19013 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC16.86■□□□□ 0.29
KRT4P19013 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
KRT4P19013 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
KRT4P19013 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
KRT4P19013 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC16.86■□□□□ 0.29
KRT4P19013 AL671277.2-201ENST00000458060 996 ntBASIC16.86■□□□□ 0.29
KRT4P19013 KRT8P26-201ENST00000534154 1276 ntBASIC16.86■□□□□ 0.29
KRT4P19013 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC16.86■□□□□ 0.29
KRT4P19013 AC013467.2-201ENST00000605472 835 ntBASIC16.86■□□□□ 0.29
KRT4P19013 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
KRT4P19013 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC16.86■□□□□ 0.29
KRT4P19013 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC16.86■□□□□ 0.29
KRT4P19013 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
KRT4P19013 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
KRT4P19013 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 47.8 ms