Protein–RNA interactions for Protein: P18074

ERCC2, TFIIH basal transcription factor complex helicase XPD subunit, humanhuman

Predictions only

Length 760 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2P18074 AQP6-205ENST00000618286 829 ntTSL 5 BASIC17.24■□□□□ 0.35
ERCC2P18074 AL645728.2-201ENST00000641974 660 ntBASIC17.24■□□□□ 0.35
ERCC2P18074 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ERCC2P18074 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
ERCC2P18074 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC17.24■□□□□ 0.35
ERCC2P18074 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
ERCC2P18074 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
ERCC2P18074 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC17.24■□□□□ 0.35
ERCC2P18074 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC17.24■□□□□ 0.35
ERCC2P18074 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
ERCC2P18074 AL118508.1-201ENST00000613502 2345 ntBASIC17.24■□□□□ 0.35
ERCC2P18074 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ERCC2P18074 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
ERCC2P18074 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ERCC2P18074 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ERCC2P18074 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
ERCC2P18074 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
ERCC2P18074 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC17.23■□□□□ 0.35
ERCC2P18074 SLC9A3P2-201ENST00000447821 2021 ntBASIC17.23■□□□□ 0.35
ERCC2P18074 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
ERCC2P18074 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
ERCC2P18074 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC17.23■□□□□ 0.35
ERCC2P18074 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ERCC2P18074 BEX3-201ENST00000361298 921 ntTSL 2 BASIC17.23■□□□□ 0.35
ERCC2P18074 WDR53-204ENST00000433160 887 ntTSL 5 BASIC17.23■□□□□ 0.35
ERCC2P18074 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC17.23■□□□□ 0.35
ERCC2P18074 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC17.23■□□□□ 0.35
ERCC2P18074 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC17.23■□□□□ 0.35
ERCC2P18074 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC17.23■□□□□ 0.35
ERCC2P18074 AL031432.2-201ENST00000566714 459 ntBASIC17.23■□□□□ 0.35
ERCC2P18074 AL928711.1-201ENST00000570165 459 ntBASIC17.23■□□□□ 0.35
ERCC2P18074 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
ERCC2P18074 AC140113.2-201ENST00000604370 208 ntBASIC17.23■□□□□ 0.35
ERCC2P18074 AC023141.13-201ENST00000604991 943 ntBASIC17.23■□□□□ 0.35
ERCC2P18074 AC027601.4-201ENST00000611259 610 ntBASIC17.23■□□□□ 0.35
ERCC2P18074 AC004877.2-201ENST00000623941 599 ntBASIC17.23■□□□□ 0.35
ERCC2P18074 AC007064.4-201ENST00000637740 555 ntBASIC17.23■□□□□ 0.35
ERCC2P18074 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
ERCC2P18074 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
ERCC2P18074 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ERCC2P18074 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
ERCC2P18074 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
ERCC2P18074 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC17.23■□□□□ 0.35
ERCC2P18074 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC17.23■□□□□ 0.35
ERCC2P18074 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
ERCC2P18074 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC17.23■□□□□ 0.35
ERCC2P18074 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC17.23■□□□□ 0.35
ERCC2P18074 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
ERCC2P18074 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ERCC2P18074 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
ERCC2P18074 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
ERCC2P18074 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC17.22■□□□□ 0.35
ERCC2P18074 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC17.22■□□□□ 0.35
ERCC2P18074 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC17.22■□□□□ 0.35
ERCC2P18074 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
ERCC2P18074 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
ERCC2P18074 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
ERCC2P18074 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC17.22■□□□□ 0.35
ERCC2P18074 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
ERCC2P18074 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
ERCC2P18074 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC17.22■□□□□ 0.35
ERCC2P18074 STARD13-205ENST00000439831 945 ntTSL 2 BASIC17.22■□□□□ 0.35
ERCC2P18074 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
ERCC2P18074 MTRF1LP2-201ENST00000506027 1122 ntBASIC17.22■□□□□ 0.35
ERCC2P18074 MAL2-202ENST00000531508 892 ntTSL 3 BASIC17.22■□□□□ 0.35
ERCC2P18074 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC17.22■□□□□ 0.35
ERCC2P18074 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC17.22■□□□□ 0.35
ERCC2P18074 RPL28-209ENST00000560055 670 ntTSL 3 BASIC17.22■□□□□ 0.35
ERCC2P18074 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC17.22■□□□□ 0.35
ERCC2P18074 CAND2-206ENST00000626378 333 ntTSL 5 BASIC17.22■□□□□ 0.35
ERCC2P18074 CES3-203ENST00000543856 3178 ntTSL 2 BASIC17.22■□□□□ 0.35
ERCC2P18074 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
ERCC2P18074 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
ERCC2P18074 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
ERCC2P18074 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
ERCC2P18074 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
ERCC2P18074 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
ERCC2P18074 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
ERCC2P18074 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC17.21■□□□□ 0.35
ERCC2P18074 BCAR1-209ENST00000546196 1340 ntBASIC17.21■□□□□ 0.35
ERCC2P18074 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
ERCC2P18074 AC025580.3-201ENST00000617932 1424 ntBASIC17.21■□□□□ 0.35
ERCC2P18074 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC17.21■□□□□ 0.35
ERCC2P18074 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
ERCC2P18074 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
ERCC2P18074 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
ERCC2P18074 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC17.21■□□□□ 0.35
ERCC2P18074 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
ERCC2P18074 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
ERCC2P18074 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
ERCC2P18074 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
ERCC2P18074 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC17.21■□□□□ 0.35
ERCC2P18074 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
ERCC2P18074 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC17.21■□□□□ 0.35
ERCC2P18074 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
ERCC2P18074 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
ERCC2P18074 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
ERCC2P18074 AL031731.1-201ENST00000642131 2094 ntBASIC17.21■□□□□ 0.35
ERCC2P18074 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
ERCC2P18074 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms