Protein–RNA interactions for Protein: P17661

DES, Desmin, humanhuman

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DESP17661 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
DESP17661 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
DESP17661 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC17.75■□□□□ 0.43
DESP17661 AC006504.4-201ENST00000592118 1568 ntBASIC17.75■□□□□ 0.43
DESP17661 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
DESP17661 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
DESP17661 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
DESP17661 OS9-205ENST00000413095 1660 ntTSL 2 BASIC17.75■□□□□ 0.43
DESP17661 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
DESP17661 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
DESP17661 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC17.75■□□□□ 0.43
DESP17661 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC17.75■□□□□ 0.43
DESP17661 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC17.75■□□□□ 0.43
DESP17661 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
DESP17661 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
DESP17661 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC17.75■□□□□ 0.43
DESP17661 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
DESP17661 RPS29-206ENST00000557111 488 ntTSL 2 BASIC17.75■□□□□ 0.43
DESP17661 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC17.75■□□□□ 0.43
DESP17661 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC17.75■□□□□ 0.43
DESP17661 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC17.75■□□□□ 0.43
DESP17661 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC17.75■□□□□ 0.43
DESP17661 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
DESP17661 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
DESP17661 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
DESP17661 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
DESP17661 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC17.75■□□□□ 0.43
DESP17661 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
DESP17661 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
DESP17661 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
DESP17661 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
DESP17661 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
DESP17661 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
DESP17661 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
DESP17661 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
DESP17661 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC17.74■□□□□ 0.43
DESP17661 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
DESP17661 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC17.74■□□□□ 0.43
DESP17661 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
DESP17661 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
DESP17661 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
DESP17661 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
DESP17661 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
DESP17661 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC17.74■□□□□ 0.43
DESP17661 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC17.74■□□□□ 0.43
DESP17661 AC087163.2-201ENST00000457299 853 ntBASIC17.74■□□□□ 0.43
DESP17661 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
DESP17661 AL773604.1-201ENST00000617417 272 ntBASIC17.74■□□□□ 0.43
DESP17661 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
DESP17661 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
DESP17661 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
DESP17661 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
DESP17661 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC17.74■□□□□ 0.43
DESP17661 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC17.74■□□□□ 0.43
DESP17661 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC17.74■□□□□ 0.43
DESP17661 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
DESP17661 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
DESP17661 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
DESP17661 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
DESP17661 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC17.74■□□□□ 0.43
DESP17661 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
DESP17661 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
DESP17661 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
DESP17661 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
DESP17661 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC17.74■□□□□ 0.43
DESP17661 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
DESP17661 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC17.73■□□□□ 0.43
DESP17661 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
DESP17661 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
DESP17661 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
DESP17661 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
DESP17661 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
DESP17661 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
DESP17661 LINC00895-201ENST00000629028 1637 ntBASIC17.73■□□□□ 0.43
DESP17661 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC17.73■□□□□ 0.43
DESP17661 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
DESP17661 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
DESP17661 AC011676.5-201ENST00000624864 2660 ntBASIC17.73■□□□□ 0.43
DESP17661 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC17.73■□□□□ 0.43
DESP17661 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
DESP17661 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
DESP17661 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
DESP17661 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC17.73■□□□□ 0.43
DESP17661 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC17.73■□□□□ 0.43
DESP17661 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC17.73■□□□□ 0.43
DESP17661 METTL26-205ENST00000397666 726 ntTSL 2 BASIC17.73■□□□□ 0.43
DESP17661 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
DESP17661 ATP6V0CP3-201ENST00000417255 467 ntBASIC17.73■□□□□ 0.43
DESP17661 SLC4A1APP2-201ENST00000424054 1259 ntBASIC17.73■□□□□ 0.43
DESP17661 KRT18P27-201ENST00000427733 1299 ntBASIC17.73■□□□□ 0.43
DESP17661 AC018712.1-201ENST00000455767 687 ntBASIC17.73■□□□□ 0.43
DESP17661 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
DESP17661 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC17.73■□□□□ 0.43
DESP17661 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC17.73■□□□□ 0.43
DESP17661 AL356488.2-201ENST00000602755 427 ntBASIC17.73■□□□□ 0.43
DESP17661 AP001350.2-201ENST00000625104 1094 ntBASIC17.73■□□□□ 0.43
DESP17661 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC17.73■□□□□ 0.43
DESP17661 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
DESP17661 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
DESP17661 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 44.1 ms