Protein–RNA interactions for Protein: P16298

PPP3CB, Serine/threonine-protein phosphatase 2B catalytic subunit beta isoform, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP3CBP16298 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
PPP3CBP16298 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PPP3CBP16298 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
PPP3CBP16298 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PPP3CBP16298 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
PPP3CBP16298 AGK-211ENST00000629555 2765 ntTSL 5 BASIC15.12■□□□□ 0.01
PPP3CBP16298 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC15.12■□□□□ 0.01
PPP3CBP16298 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
PPP3CBP16298 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PPP3CBP16298 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
PPP3CBP16298 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC15.12■□□□□ 0.01
PPP3CBP16298 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC15.12■□□□□ 0.01
PPP3CBP16298 HOTTIP_1.1-201ENST00000620415 57 ntBASIC15.12■□□□□ 0.01
PPP3CBP16298 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC15.12■□□□□ 0.01
PPP3CBP16298 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC15.12■□□□□ 0.01
PPP3CBP16298 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC15.12■□□□□ 0.01
PPP3CBP16298 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC15.12■□□□□ 0.01
PPP3CBP16298 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
PPP3CBP16298 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PPP3CBP16298 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
PPP3CBP16298 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
PPP3CBP16298 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
PPP3CBP16298 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
PPP3CBP16298 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PPP3CBP16298 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC15.12■□□□□ 0.01
PPP3CBP16298 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC15.12■□□□□ 0.01
PPP3CBP16298 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
PPP3CBP16298 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
PPP3CBP16298 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PPP3CBP16298 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
PPP3CBP16298 AGGF1P2-201ENST00000426656 2106 ntBASIC15.11■□□□□ 0.01
PPP3CBP16298 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC15.11■□□□□ 0.01
PPP3CBP16298 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PPP3CBP16298 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
PPP3CBP16298 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
PPP3CBP16298 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PPP3CBP16298 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PPP3CBP16298 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PPP3CBP16298 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC15.11■□□□□ 0.01
PPP3CBP16298 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC15.11■□□□□ 0.01
PPP3CBP16298 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC15.11■□□□□ 0.01
PPP3CBP16298 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PPP3CBP16298 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
PPP3CBP16298 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC15.11■□□□□ 0.01
PPP3CBP16298 GPX1P2-201ENST00000429271 606 ntBASIC15.11■□□□□ 0.01
PPP3CBP16298 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC15.11■□□□□ 0.01
PPP3CBP16298 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC15.11■□□□□ 0.01
PPP3CBP16298 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC15.11■□□□□ 0.01
PPP3CBP16298 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
PPP3CBP16298 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
PPP3CBP16298 NFIC-211ENST00000641145 8399 ntBASIC15.11■□□□□ 0.01
PPP3CBP16298 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
PPP3CBP16298 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PPP3CBP16298 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PPP3CBP16298 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC15.11■□□□□ 0.01
PPP3CBP16298 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PPP3CBP16298 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PPP3CBP16298 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
PPP3CBP16298 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC15.11■□□□□ 0.01
PPP3CBP16298 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PPP3CBP16298 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC15.11■□□□□ 0.01
PPP3CBP16298 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PPP3CBP16298 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
PPP3CBP16298 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
PPP3CBP16298 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
PPP3CBP16298 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
PPP3CBP16298 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
PPP3CBP16298 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
PPP3CBP16298 OS9-205ENST00000413095 1660 ntTSL 2 BASIC15.1■□□□□ 0.01
PPP3CBP16298 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
PPP3CBP16298 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC15.1■□□□□ 0.01
PPP3CBP16298 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
PPP3CBP16298 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
PPP3CBP16298 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC15.1■□□□□ 0.01
PPP3CBP16298 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC15.1■□□□□ 0.01
PPP3CBP16298 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
PPP3CBP16298 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC15.1■□□□□ 0.01
PPP3CBP16298 RPSAP43-201ENST00000402237 625 ntBASIC15.1■□□□□ 0.01
PPP3CBP16298 PTCHD3P3-201ENST00000403073 906 ntBASIC15.1■□□□□ 0.01
PPP3CBP16298 NABP1-203ENST00000409510 843 ntTSL 5 BASIC15.1■□□□□ 0.01
PPP3CBP16298 COA5-202ENST00000409997 557 ntTSL 4 BASIC15.1■□□□□ 0.01
PPP3CBP16298 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC15.1■□□□□ 0.01
PPP3CBP16298 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC15.1■□□□□ 0.01
PPP3CBP16298 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC15.1■□□□□ 0.01
PPP3CBP16298 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC15.1■□□□□ 0.01
PPP3CBP16298 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC15.1■□□□□ 0.01
PPP3CBP16298 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC15.1■□□□□ 0.01
PPP3CBP16298 LINC02199-201ENST00000506655 2702 ntBASIC15.1■□□□□ 0.01
PPP3CBP16298 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC15.1■□□□□ 0.01
PPP3CBP16298 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC15.1■□□□□ 0.01
PPP3CBP16298 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC15.1■□□□□ 0.01
PPP3CBP16298 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
PPP3CBP16298 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
PPP3CBP16298 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC15.1■□□□□ 0.01
PPP3CBP16298 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC15.1■□□□□ 0.01
PPP3CBP16298 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC15.1■□□□□ 0.01
PPP3CBP16298 AC046185.3-201ENST00000623228 1824 ntBASIC15.1■□□□□ 0.01
PPP3CBP16298 AMT-250ENST00000637682 1823 ntTSL 5 BASIC15.1■□□□□ 0.01
PPP3CBP16298 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
PPP3CBP16298 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms