Protein–RNA interactions for Protein: P12645

BMP3, Bone morphogenetic protein 3, humanhuman

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BMP3P12645 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
BMP3P12645 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
BMP3P12645 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
BMP3P12645 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC19.25■□□□□ 0.67
BMP3P12645 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
BMP3P12645 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
BMP3P12645 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
BMP3P12645 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
BMP3P12645 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
BMP3P12645 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC19.24■□□□□ 0.67
BMP3P12645 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
BMP3P12645 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
BMP3P12645 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
BMP3P12645 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
BMP3P12645 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
BMP3P12645 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
BMP3P12645 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
BMP3P12645 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
BMP3P12645 DPM2-202ENST00000373110 738 ntTSL 2 BASIC19.24■□□□□ 0.67
BMP3P12645 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC19.24■□□□□ 0.67
BMP3P12645 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC19.24■□□□□ 0.67
BMP3P12645 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC19.24■□□□□ 0.67
BMP3P12645 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC19.24■□□□□ 0.67
BMP3P12645 AC125807.1-201ENST00000483097 614 ntBASIC19.24■□□□□ 0.67
BMP3P12645 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
BMP3P12645 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC19.24■□□□□ 0.67
BMP3P12645 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC19.24■□□□□ 0.67
BMP3P12645 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC19.24■□□□□ 0.67
BMP3P12645 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC19.24■□□□□ 0.67
BMP3P12645 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC19.24■□□□□ 0.67
BMP3P12645 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
BMP3P12645 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC19.24■□□□□ 0.67
BMP3P12645 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
BMP3P12645 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
BMP3P12645 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
BMP3P12645 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
BMP3P12645 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
BMP3P12645 CEP83-AS1-201ENST00000623122 2482 ntBASIC19.24■□□□□ 0.67
BMP3P12645 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
BMP3P12645 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
BMP3P12645 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
BMP3P12645 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC19.23■□□□□ 0.67
BMP3P12645 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
BMP3P12645 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
BMP3P12645 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
BMP3P12645 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC19.23■□□□□ 0.67
BMP3P12645 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
BMP3P12645 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
BMP3P12645 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
BMP3P12645 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC19.23■□□□□ 0.67
BMP3P12645 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
BMP3P12645 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC19.23■□□□□ 0.67
BMP3P12645 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
BMP3P12645 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC19.23■□□□□ 0.67
BMP3P12645 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
BMP3P12645 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
BMP3P12645 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
BMP3P12645 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC19.23■□□□□ 0.67
BMP3P12645 WRB-204ENST00000398753 699 ntTSL 3 BASIC19.23■□□□□ 0.67
BMP3P12645 MIR943-201ENST00000401286 94 ntBASIC19.23■□□□□ 0.67
BMP3P12645 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
BMP3P12645 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC19.23■□□□□ 0.67
BMP3P12645 AC107890.1-201ENST00000422478 521 ntBASIC19.23■□□□□ 0.67
BMP3P12645 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC19.23■□□□□ 0.67
BMP3P12645 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC19.23■□□□□ 0.67
BMP3P12645 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC19.23■□□□□ 0.67
BMP3P12645 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC19.23■□□□□ 0.67
BMP3P12645 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC19.23■□□□□ 0.67
BMP3P12645 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
BMP3P12645 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
BMP3P12645 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC19.23■□□□□ 0.67
BMP3P12645 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
BMP3P12645 FOXO1B-201ENST00000504678 1527 ntBASIC19.23■□□□□ 0.67
BMP3P12645 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC19.23■□□□□ 0.67
BMP3P12645 AC073439.1-201ENST00000624121 1774 ntBASIC19.23■□□□□ 0.67
BMP3P12645 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
BMP3P12645 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
BMP3P12645 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
BMP3P12645 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
BMP3P12645 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC19.23■□□□□ 0.67
BMP3P12645 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
BMP3P12645 AP001094.4-201ENST00000579008 2176 ntBASIC19.23■□□□□ 0.67
BMP3P12645 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
BMP3P12645 EML3-212ENST00000494176 2901 ntTSL 2 BASIC19.23■□□□□ 0.67
BMP3P12645 EML3-216ENST00000529309 2909 ntTSL 2 BASIC19.23■□□□□ 0.67
BMP3P12645 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
BMP3P12645 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC19.23■□□□□ 0.67
BMP3P12645 AP3S2-216ENST00000617003 1561 ntBASIC19.23■□□□□ 0.67
BMP3P12645 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC19.23■□□□□ 0.67
BMP3P12645 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
BMP3P12645 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
BMP3P12645 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
BMP3P12645 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
BMP3P12645 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
BMP3P12645 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
BMP3P12645 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC19.22■□□□□ 0.67
BMP3P12645 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
BMP3P12645 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC19.22■□□□□ 0.67
BMP3P12645 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
BMP3P12645 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC19.22■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms