Protein–RNA interactions for Protein: P12036

NEFH, Neurofilament heavy polypeptide, humanhuman

Predictions only

Length 1,026 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEFHP12036 AC087499.1-201ENST00000418141 1075 ntBASIC17.11■□□□□ 0.33
NEFHP12036 HLA-F-220ENST00000434407 884 ntBASIC17.11■□□□□ 0.33
NEFHP12036 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC17.11■□□□□ 0.33
NEFHP12036 AC068472.1-201ENST00000474589 881 ntBASIC17.11■□□□□ 0.33
NEFHP12036 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC17.11■□□□□ 0.33
NEFHP12036 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC17.11■□□□□ 0.33
NEFHP12036 AC093827.2-201ENST00000512654 315 ntBASIC17.11■□□□□ 0.33
NEFHP12036 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
NEFHP12036 ZNF444P1-201ENST00000559497 298 ntBASIC17.11■□□□□ 0.33
NEFHP12036 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC17.11■□□□□ 0.33
NEFHP12036 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
NEFHP12036 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
NEFHP12036 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
NEFHP12036 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
NEFHP12036 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
NEFHP12036 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
NEFHP12036 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
NEFHP12036 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC17.11■□□□□ 0.33
NEFHP12036 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
NEFHP12036 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
NEFHP12036 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC17.11■□□□□ 0.33
NEFHP12036 CHRNA7-201ENST00000306901 6181 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
NEFHP12036 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
NEFHP12036 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC17.11■□□□□ 0.33
NEFHP12036 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
NEFHP12036 AC010460.3-201ENST00000511359 1579 ntBASIC17.11■□□□□ 0.33
NEFHP12036 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
NEFHP12036 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC17.1■□□□□ 0.33
NEFHP12036 AC099063.4-201ENST00000641099 1602 ntBASIC17.1■□□□□ 0.33
NEFHP12036 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
NEFHP12036 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
NEFHP12036 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
NEFHP12036 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
NEFHP12036 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
NEFHP12036 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
NEFHP12036 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC17.1■□□□□ 0.33
NEFHP12036 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
NEFHP12036 KNDC1-201ENST00000304613 6793 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
NEFHP12036 NPFFR1-201ENST00000277942 8921 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
NEFHP12036 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC17.1■□□□□ 0.33
NEFHP12036 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
NEFHP12036 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
NEFHP12036 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC17.1■□□□□ 0.33
NEFHP12036 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC17.1■□□□□ 0.33
NEFHP12036 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
NEFHP12036 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
NEFHP12036 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC17.1■□□□□ 0.33
NEFHP12036 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
NEFHP12036 STARP1-201ENST00000397973 869 ntBASIC17.1■□□□□ 0.33
NEFHP12036 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC17.1■□□□□ 0.33
NEFHP12036 PON3-205ENST00000451904 1053 ntTSL 3 BASIC17.1■□□□□ 0.33
NEFHP12036 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
NEFHP12036 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
NEFHP12036 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
NEFHP12036 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
NEFHP12036 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
NEFHP12036 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
NEFHP12036 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
NEFHP12036 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
NEFHP12036 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
NEFHP12036 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC17.1■□□□□ 0.33
NEFHP12036 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC17.1■□□□□ 0.33
NEFHP12036 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
NEFHP12036 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
NEFHP12036 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
NEFHP12036 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
NEFHP12036 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
NEFHP12036 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
NEFHP12036 GTPBP1-201ENST00000216044 5126 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
NEFHP12036 AC097374.1-201ENST00000568768 6624 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
NEFHP12036 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
NEFHP12036 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
NEFHP12036 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC17.09■□□□□ 0.33
NEFHP12036 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC17.09■□□□□ 0.33
NEFHP12036 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
NEFHP12036 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
NEFHP12036 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
NEFHP12036 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
NEFHP12036 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
NEFHP12036 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
NEFHP12036 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
NEFHP12036 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
NEFHP12036 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
NEFHP12036 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
NEFHP12036 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC17.09■□□□□ 0.33
NEFHP12036 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
NEFHP12036 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
NEFHP12036 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
NEFHP12036 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
NEFHP12036 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
NEFHP12036 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC17.09■□□□□ 0.33
NEFHP12036 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC17.09■□□□□ 0.33
NEFHP12036 AC111152.3-201ENST00000569699 673 ntBASIC17.09■□□□□ 0.33
NEFHP12036 LITAF-220ENST00000620789 692 ntTSL 5 BASIC17.09■□□□□ 0.33
NEFHP12036 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
NEFHP12036 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC17.09■□□□□ 0.33
NEFHP12036 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
NEFHP12036 LGALS8-AS1-201ENST00000487567 1457 ntBASIC17.09■□□□□ 0.33
NEFHP12036 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
NEFHP12036 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms