Protein–RNA interactions for Protein: P0DP04

IGHV3-43D, Immunoglobulin heavy variable 3-43D, humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-43DP0DP04 HIST2H3DP1-201ENST00000401004 416 ntBASIC13.98□□□□□ -0.17
IGHV3-43DP0DP04 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
IGHV3-43DP0DP04 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC13.98□□□□□ -0.17
IGHV3-43DP0DP04 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC13.98□□□□□ -0.17
IGHV3-43DP0DP04 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
IGHV3-43DP0DP04 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
IGHV3-43DP0DP04 UNC93B7-201ENST00000509439 705 ntBASIC13.98□□□□□ -0.17
IGHV3-43DP0DP04 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC13.98□□□□□ -0.17
IGHV3-43DP0DP04 AC021087.4-201ENST00000563761 564 ntBASIC13.98□□□□□ -0.17
IGHV3-43DP0DP04 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
IGHV3-43DP0DP04 AC025062.2-201ENST00000605477 670 ntBASIC13.98□□□□□ -0.17
IGHV3-43DP0DP04 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC13.98□□□□□ -0.17
IGHV3-43DP0DP04 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC13.98□□□□□ -0.17
IGHV3-43DP0DP04 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
IGHV3-43DP0DP04 AC092364.2-201ENST00000596710 2692 ntBASIC13.98□□□□□ -0.17
IGHV3-43DP0DP04 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
IGHV3-43DP0DP04 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
IGHV3-43DP0DP04 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
IGHV3-43DP0DP04 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
IGHV3-43DP0DP04 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
IGHV3-43DP0DP04 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
IGHV3-43DP0DP04 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
IGHV3-43DP0DP04 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
IGHV3-43DP0DP04 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
IGHV3-43DP0DP04 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC13.98□□□□□ -0.17
IGHV3-43DP0DP04 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
IGHV3-43DP0DP04 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC13.98□□□□□ -0.17
IGHV3-43DP0DP04 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
IGHV3-43DP0DP04 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
IGHV3-43DP0DP04 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
IGHV3-43DP0DP04 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
IGHV3-43DP0DP04 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
IGHV3-43DP0DP04 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
IGHV3-43DP0DP04 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
IGHV3-43DP0DP04 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
IGHV3-43DP0DP04 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
IGHV3-43DP0DP04 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
IGHV3-43DP0DP04 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
IGHV3-43DP0DP04 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
IGHV3-43DP0DP04 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC13.97□□□□□ -0.17
IGHV3-43DP0DP04 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
IGHV3-43DP0DP04 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC13.97□□□□□ -0.17
IGHV3-43DP0DP04 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
IGHV3-43DP0DP04 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC13.97□□□□□ -0.17
IGHV3-43DP0DP04 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
IGHV3-43DP0DP04 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
IGHV3-43DP0DP04 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC13.97□□□□□ -0.17
IGHV3-43DP0DP04 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
IGHV3-43DP0DP04 RAB17-203ENST00000409576 466 ntTSL 3 BASIC13.97□□□□□ -0.17
IGHV3-43DP0DP04 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC13.97□□□□□ -0.17
IGHV3-43DP0DP04 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
IGHV3-43DP0DP04 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC13.97□□□□□ -0.17
IGHV3-43DP0DP04 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC13.97□□□□□ -0.17
IGHV3-43DP0DP04 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC13.97□□□□□ -0.17
IGHV3-43DP0DP04 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
IGHV3-43DP0DP04 AC004706.3-202ENST00000621574 984 ntBASIC13.97□□□□□ -0.17
IGHV3-43DP0DP04 PI4KAP1-204ENST00000612579 1703 ntBASIC13.97□□□□□ -0.17
IGHV3-43DP0DP04 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
IGHV3-43DP0DP04 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
IGHV3-43DP0DP04 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
IGHV3-43DP0DP04 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
IGHV3-43DP0DP04 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
IGHV3-43DP0DP04 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
IGHV3-43DP0DP04 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC13.97□□□□□ -0.17
IGHV3-43DP0DP04 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
IGHV3-43DP0DP04 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
IGHV3-43DP0DP04 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC13.97□□□□□ -0.17
IGHV3-43DP0DP04 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
IGHV3-43DP0DP04 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
IGHV3-43DP0DP04 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC13.97□□□□□ -0.17
IGHV3-43DP0DP04 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
IGHV3-43DP0DP04 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
IGHV3-43DP0DP04 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
IGHV3-43DP0DP04 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
IGHV3-43DP0DP04 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
IGHV3-43DP0DP04 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
IGHV3-43DP0DP04 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
IGHV3-43DP0DP04 AC006504.4-201ENST00000592118 1568 ntBASIC13.96□□□□□ -0.17
IGHV3-43DP0DP04 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC13.96□□□□□ -0.17
IGHV3-43DP0DP04 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
IGHV3-43DP0DP04 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC13.96□□□□□ -0.17
IGHV3-43DP0DP04 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC13.96□□□□□ -0.17
IGHV3-43DP0DP04 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC13.96□□□□□ -0.17
IGHV3-43DP0DP04 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
IGHV3-43DP0DP04 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
IGHV3-43DP0DP04 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
IGHV3-43DP0DP04 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
IGHV3-43DP0DP04 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC13.96□□□□□ -0.17
IGHV3-43DP0DP04 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC13.96□□□□□ -0.17
IGHV3-43DP0DP04 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC13.96□□□□□ -0.17
IGHV3-43DP0DP04 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC13.96□□□□□ -0.17
IGHV3-43DP0DP04 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
IGHV3-43DP0DP04 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC13.96□□□□□ -0.17
IGHV3-43DP0DP04 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
IGHV3-43DP0DP04 PTCHD3P3-201ENST00000403073 906 ntBASIC13.96□□□□□ -0.17
IGHV3-43DP0DP04 ELK2BP-201ENST00000415014 1224 ntBASIC13.96□□□□□ -0.17
IGHV3-43DP0DP04 RPS2P1-201ENST00000434010 821 ntBASIC13.96□□□□□ -0.17
IGHV3-43DP0DP04 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC13.96□□□□□ -0.17
IGHV3-43DP0DP04 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC13.96□□□□□ -0.17
IGHV3-43DP0DP04 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms