Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC16.9■□□□□ 0.3
RETP07949 AC004233.3-201ENST00000607794 1269 ntBASIC16.9■□□□□ 0.3
RETP07949 MIR6799-201ENST00000620297 69 ntBASIC16.9■□□□□ 0.3
RETP07949 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC16.9■□□□□ 0.3
RETP07949 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC16.9■□□□□ 0.3
RETP07949 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
RETP07949 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC16.9■□□□□ 0.3
RETP07949 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
RETP07949 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC16.9■□□□□ 0.3
RETP07949 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
RETP07949 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
RETP07949 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC16.9■□□□□ 0.3
RETP07949 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
RETP07949 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC16.9■□□□□ 0.3
RETP07949 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
RETP07949 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RETP07949 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
RETP07949 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC16.89■□□□□ 0.3
RETP07949 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
RETP07949 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC16.89■□□□□ 0.29
RETP07949 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC16.89■□□□□ 0.29
RETP07949 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC16.89■□□□□ 0.29
RETP07949 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RETP07949 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
RETP07949 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
RETP07949 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
RETP07949 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RETP07949 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RETP07949 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
RETP07949 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC16.89■□□□□ 0.29
RETP07949 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
RETP07949 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
RETP07949 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
RETP07949 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC16.89■□□□□ 0.29
RETP07949 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RETP07949 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
RETP07949 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC16.89■□□□□ 0.29
RETP07949 GPR53P-205ENST00000457298 1084 ntBASIC16.89■□□□□ 0.29
RETP07949 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC16.89■□□□□ 0.29
RETP07949 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
RETP07949 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC16.89■□□□□ 0.29
RETP07949 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RETP07949 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
RETP07949 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC16.89■□□□□ 0.29
RETP07949 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
RETP07949 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
RETP07949 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC16.89■□□□□ 0.29
RETP07949 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RETP07949 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
RETP07949 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC16.89■□□□□ 0.29
RETP07949 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RETP07949 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
RETP07949 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC16.89■□□□□ 0.29
RETP07949 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC16.88■□□□□ 0.29
RETP07949 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
RETP07949 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC16.88■□□□□ 0.29
RETP07949 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC16.88■□□□□ 0.29
RETP07949 NKILA-202ENST00000614771 2598 ntBASIC16.88■□□□□ 0.29
RETP07949 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC16.88■□□□□ 0.29
RETP07949 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
RETP07949 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC16.88■□□□□ 0.29
RETP07949 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RETP07949 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
RETP07949 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RETP07949 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RETP07949 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RETP07949 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
RETP07949 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
RETP07949 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RETP07949 CROCCP2-202ENST00000412962 2773 ntBASIC16.88■□□□□ 0.29
RETP07949 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RETP07949 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
RETP07949 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
RETP07949 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
RETP07949 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RETP07949 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
RETP07949 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
RETP07949 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC16.88■□□□□ 0.29
RETP07949 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC16.88■□□□□ 0.29
RETP07949 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
RETP07949 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC16.88■□□□□ 0.29
RETP07949 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
RETP07949 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC16.88■□□□□ 0.29
RETP07949 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC16.88■□□□□ 0.29
RETP07949 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC16.88■□□□□ 0.29
RETP07949 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
RETP07949 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC16.88■□□□□ 0.29
RETP07949 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RETP07949 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC16.88■□□□□ 0.29
RETP07949 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
RETP07949 NF2-208ENST00000403435 2568 ntTSL 5 BASIC16.87■□□□□ 0.29
RETP07949 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RETP07949 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
RETP07949 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC16.87■□□□□ 0.29
RETP07949 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
RETP07949 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RETP07949 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
RETP07949 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RETP07949 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
RETP07949 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 53.7 ms