Protein–RNA interactions for Protein: P06727

APOA4, Apolipoprotein A-IV, humanhuman

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOA4P06727 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
APOA4P06727 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC16.84■□□□□ 0.29
APOA4P06727 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC16.84■□□□□ 0.29
APOA4P06727 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
APOA4P06727 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC16.84■□□□□ 0.29
APOA4P06727 INIP-202ENST00000374236 874 ntTSL 2 BASIC16.84■□□□□ 0.29
APOA4P06727 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC16.84■□□□□ 0.29
APOA4P06727 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
APOA4P06727 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC16.84■□□□□ 0.29
APOA4P06727 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC16.84■□□□□ 0.29
APOA4P06727 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC16.84■□□□□ 0.29
APOA4P06727 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC16.84■□□□□ 0.29
APOA4P06727 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC16.84■□□□□ 0.29
APOA4P06727 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC16.84■□□□□ 0.29
APOA4P06727 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC16.84■□□□□ 0.29
APOA4P06727 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC16.84■□□□□ 0.29
APOA4P06727 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC16.84■□□□□ 0.29
APOA4P06727 AC104692.2-201ENST00000603054 253 ntBASIC16.84■□□□□ 0.29
APOA4P06727 MIR1199-201ENST00000621445 119 ntBASIC16.84■□□□□ 0.29
APOA4P06727 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
APOA4P06727 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC16.84■□□□□ 0.29
APOA4P06727 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC16.84■□□□□ 0.29
APOA4P06727 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
APOA4P06727 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
APOA4P06727 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC16.84■□□□□ 0.29
APOA4P06727 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
APOA4P06727 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
APOA4P06727 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
APOA4P06727 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
APOA4P06727 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
APOA4P06727 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC16.84■□□□□ 0.29
APOA4P06727 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC16.84■□□□□ 0.29
APOA4P06727 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
APOA4P06727 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
APOA4P06727 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC16.84■□□□□ 0.29
APOA4P06727 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.29
APOA4P06727 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC16.83■□□□□ 0.29
APOA4P06727 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
APOA4P06727 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.29
APOA4P06727 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.29
APOA4P06727 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
APOA4P06727 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC16.83■□□□□ 0.28
APOA4P06727 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC16.83■□□□□ 0.28
APOA4P06727 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
APOA4P06727 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC16.83■□□□□ 0.28
APOA4P06727 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
APOA4P06727 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC16.83■□□□□ 0.28
APOA4P06727 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
APOA4P06727 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
APOA4P06727 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC16.83■□□□□ 0.28
APOA4P06727 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
APOA4P06727 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC16.83■□□□□ 0.28
APOA4P06727 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC16.83■□□□□ 0.28
APOA4P06727 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC16.83■□□□□ 0.28
APOA4P06727 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
APOA4P06727 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
APOA4P06727 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC16.83■□□□□ 0.28
APOA4P06727 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC16.83■□□□□ 0.28
APOA4P06727 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC16.83■□□□□ 0.28
APOA4P06727 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
APOA4P06727 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC16.83■□□□□ 0.28
APOA4P06727 AL773604.1-201ENST00000617417 272 ntBASIC16.83■□□□□ 0.28
APOA4P06727 AC022188.1-201ENST00000620960 1664 ntBASIC16.83■□□□□ 0.28
APOA4P06727 AC008735.5-201ENST00000623544 497 ntBASIC16.83■□□□□ 0.28
APOA4P06727 LINC00895-201ENST00000629028 1637 ntBASIC16.83■□□□□ 0.28
APOA4P06727 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
APOA4P06727 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
APOA4P06727 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC16.82■□□□□ 0.28
APOA4P06727 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
APOA4P06727 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
APOA4P06727 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
APOA4P06727 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
APOA4P06727 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
APOA4P06727 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
APOA4P06727 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
APOA4P06727 CES3-203ENST00000543856 3178 ntTSL 2 BASIC16.82■□□□□ 0.28
APOA4P06727 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
APOA4P06727 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
APOA4P06727 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
APOA4P06727 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC16.82■□□□□ 0.28
APOA4P06727 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
APOA4P06727 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
APOA4P06727 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
APOA4P06727 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
APOA4P06727 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
APOA4P06727 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC16.82■□□□□ 0.28
APOA4P06727 ELK2BP-201ENST00000415014 1224 ntBASIC16.82■□□□□ 0.28
APOA4P06727 HNRNPDP1-201ENST00000439535 754 ntBASIC16.82■□□□□ 0.28
APOA4P06727 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC16.82■□□□□ 0.28
APOA4P06727 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC16.82■□□□□ 0.28
APOA4P06727 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC16.82■□□□□ 0.28
APOA4P06727 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC16.82■□□□□ 0.28
APOA4P06727 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC16.82■□□□□ 0.28
APOA4P06727 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC16.82■□□□□ 0.28
APOA4P06727 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
APOA4P06727 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
APOA4P06727 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
APOA4P06727 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
APOA4P06727 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
APOA4P06727 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 50.5 ms