Protein–RNA interactions for Protein: P04437

TCRA, T-cell receptor alpha chain V region CTL-L17, humanhuman

Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRAP04437 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
TCRAP04437 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
TCRAP04437 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
TCRAP04437 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
TCRAP04437 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
TCRAP04437 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
TCRAP04437 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC12.81□□□□□ -0.36
TCRAP04437 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
TCRAP04437 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
TCRAP04437 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
TCRAP04437 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
TCRAP04437 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC12.81□□□□□ -0.36
TCRAP04437 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC12.81□□□□□ -0.36
TCRAP04437 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
TCRAP04437 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
TCRAP04437 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC12.81□□□□□ -0.36
TCRAP04437 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
TCRAP04437 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
TCRAP04437 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
TCRAP04437 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
TCRAP04437 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC12.81□□□□□ -0.36
TCRAP04437 ACTG1P4-201ENST00000425123 1122 ntBASIC12.81□□□□□ -0.36
TCRAP04437 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC12.81□□□□□ -0.36
TCRAP04437 AC009533.2-201ENST00000543664 586 ntBASIC12.81□□□□□ -0.36
TCRAP04437 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
TCRAP04437 AL603832.2-201ENST00000566195 2125 ntBASIC12.81□□□□□ -0.36
TCRAP04437 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC12.81□□□□□ -0.36
TCRAP04437 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
TCRAP04437 HYMAI.1-201ENST00000620949 238 ntBASIC12.81□□□□□ -0.36
TCRAP04437 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
TCRAP04437 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC12.81□□□□□ -0.36
TCRAP04437 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
TCRAP04437 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC12.81□□□□□ -0.36
TCRAP04437 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC12.81□□□□□ -0.36
TCRAP04437 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
TCRAP04437 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC12.81□□□□□ -0.36
TCRAP04437 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
TCRAP04437 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC12.81□□□□□ -0.36
TCRAP04437 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC12.81□□□□□ -0.36
TCRAP04437 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
TCRAP04437 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC12.81□□□□□ -0.36
TCRAP04437 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
TCRAP04437 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
TCRAP04437 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
TCRAP04437 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
TCRAP04437 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC12.8□□□□□ -0.36
TCRAP04437 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
TCRAP04437 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
TCRAP04437 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
TCRAP04437 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
TCRAP04437 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
TCRAP04437 KRT8P49-201ENST00000604166 1432 ntBASIC12.8□□□□□ -0.36
TCRAP04437 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
TCRAP04437 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC12.8□□□□□ -0.36
TCRAP04437 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
TCRAP04437 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
TCRAP04437 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC12.8□□□□□ -0.36
TCRAP04437 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
TCRAP04437 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
TCRAP04437 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC12.8□□□□□ -0.36
TCRAP04437 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC12.8□□□□□ -0.36
TCRAP04437 AL845331.1-201ENST00000424978 1190 ntBASIC12.8□□□□□ -0.36
TCRAP04437 AC117947.1-201ENST00000427448 529 ntBASIC12.8□□□□□ -0.36
TCRAP04437 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
TCRAP04437 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC12.8□□□□□ -0.36
TCRAP04437 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC12.8□□□□□ -0.36
TCRAP04437 AC013467.2-201ENST00000605472 835 ntBASIC12.8□□□□□ -0.36
TCRAP04437 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
TCRAP04437 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC12.8□□□□□ -0.36
TCRAP04437 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
TCRAP04437 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
TCRAP04437 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
TCRAP04437 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
TCRAP04437 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC12.8□□□□□ -0.36
TCRAP04437 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC12.8□□□□□ -0.36
TCRAP04437 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
TCRAP04437 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC12.8□□□□□ -0.36
TCRAP04437 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC12.8□□□□□ -0.36
TCRAP04437 AC068418.2-201ENST00000577309 3703 ntBASIC12.8□□□□□ -0.36
TCRAP04437 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
TCRAP04437 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
TCRAP04437 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
TCRAP04437 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC12.8□□□□□ -0.36
TCRAP04437 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC12.8□□□□□ -0.36
TCRAP04437 AC002310.6-201ENST00000624451 1377 ntBASIC12.8□□□□□ -0.36
TCRAP04437 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
TCRAP04437 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
TCRAP04437 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
TCRAP04437 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
TCRAP04437 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
TCRAP04437 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC12.8□□□□□ -0.36
TCRAP04437 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
TCRAP04437 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
TCRAP04437 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
TCRAP04437 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
TCRAP04437 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
TCRAP04437 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
TCRAP04437 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC12.79□□□□□ -0.36
TCRAP04437 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC12.79□□□□□ -0.36
TCRAP04437 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 43.2 ms