Protein–RNA interactions for Protein: P04436

T-cell receptor alpha chain V region HPB-MLT (Fragment), humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04436 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC15.3■□□□□ 0.04
P04436 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
P04436 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
P04436 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
P04436 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
P04436 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
P04436 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
P04436 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC15.3■□□□□ 0.04
P04436 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
P04436 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC15.3■□□□□ 0.04
P04436 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC15.3■□□□□ 0.04
P04436 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
P04436 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC15.3■□□□□ 0.04
P04436 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC15.3■□□□□ 0.04
P04436 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
P04436 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC15.3■□□□□ 0.04
P04436 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
P04436 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC15.3■□□□□ 0.04
P04436 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC15.3■□□□□ 0.04
P04436 AL135744.1-201ENST00000565098 629 ntBASIC15.3■□□□□ 0.04
P04436 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC15.3■□□□□ 0.04
P04436 LETM1P2-201ENST00000597330 2178 ntBASIC15.3■□□□□ 0.04
P04436 AC022145.2-201ENST00000598203 171 ntBASIC15.3■□□□□ 0.04
P04436 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC15.3■□□□□ 0.04
P04436 AC006277.1-201ENST00000624348 1610 ntBASIC15.3■□□□□ 0.04
P04436 AL513210.1-201ENST00000629608 234 ntBASIC15.3■□□□□ 0.04
P04436 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC15.3■□□□□ 0.04
P04436 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC15.3■□□□□ 0.04
P04436 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC15.3■□□□□ 0.04
P04436 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
P04436 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
P04436 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC15.3■□□□□ 0.04
P04436 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
P04436 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
P04436 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
P04436 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC15.29■□□□□ 0.04
P04436 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC15.29■□□□□ 0.04
P04436 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
P04436 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
P04436 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC15.29■□□□□ 0.04
P04436 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
P04436 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC15.29■□□□□ 0.04
P04436 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
P04436 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
P04436 WASH6P-202ENST00000359512 1437 ntBASIC15.29■□□□□ 0.04
P04436 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
P04436 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC15.29■□□□□ 0.04
P04436 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC15.29■□□□□ 0.04
P04436 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC15.29■□□□□ 0.04
P04436 KRT18P28-201ENST00000453838 1332 ntBASIC15.29■□□□□ 0.04
P04436 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
P04436 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
P04436 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
P04436 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC15.29■□□□□ 0.04
P04436 LBH-203ENST00000404397 543 ntTSL 4 BASIC15.29■□□□□ 0.04
P04436 AC004461.1-201ENST00000412461 403 ntBASIC15.29■□□□□ 0.04
P04436 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
P04436 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC15.29■□□□□ 0.04
P04436 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC15.29■□□□□ 0.04
P04436 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
P04436 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
P04436 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC15.29■□□□□ 0.04
P04436 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
P04436 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC15.29■□□□□ 0.04
P04436 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC15.29■□□□□ 0.04
P04436 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC15.29■□□□□ 0.04
P04436 AC013467.2-201ENST00000605472 835 ntBASIC15.29■□□□□ 0.04
P04436 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
P04436 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC15.29■□□□□ 0.04
P04436 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
P04436 CEP83-AS1-201ENST00000623122 2482 ntBASIC15.29■□□□□ 0.04
P04436 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
P04436 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
P04436 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
P04436 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
P04436 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
P04436 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
P04436 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
P04436 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
P04436 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
P04436 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC15.29■□□□□ 0.04
P04436 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
P04436 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
P04436 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
P04436 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
P04436 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
P04436 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC15.28■□□□□ 0.04
P04436 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
P04436 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC15.28■□□□□ 0.04
P04436 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
P04436 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC15.28■□□□□ 0.04
P04436 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC15.28■□□□□ 0.04
P04436 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC15.28■□□□□ 0.04
P04436 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
P04436 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
P04436 AL645608.8-201ENST00000606034 2086 ntBASIC15.28■□□□□ 0.04
P04436 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
P04436 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
P04436 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
P04436 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC15.28■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 52 ms