Protein–RNA interactions for Protein: P01574

IFNB1, Interferon beta, humanhuman

Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFNB1P01574 LINC00895-201ENST00000629028 1637 ntBASIC17.41■□□□□ 0.38
IFNB1P01574 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC17.41■□□□□ 0.38
IFNB1P01574 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
IFNB1P01574 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC17.41■□□□□ 0.38
IFNB1P01574 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC17.41■□□□□ 0.38
IFNB1P01574 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC17.41■□□□□ 0.38
IFNB1P01574 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
IFNB1P01574 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC17.41■□□□□ 0.38
IFNB1P01574 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC17.41■□□□□ 0.38
IFNB1P01574 AL022326.1-202ENST00000641533 845 ntBASIC17.41■□□□□ 0.38
IFNB1P01574 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
IFNB1P01574 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
IFNB1P01574 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
IFNB1P01574 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC17.41■□□□□ 0.38
IFNB1P01574 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC17.41■□□□□ 0.38
IFNB1P01574 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
IFNB1P01574 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC17.41■□□□□ 0.38
IFNB1P01574 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC17.41■□□□□ 0.38
IFNB1P01574 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
IFNB1P01574 AC005052.1-201ENST00000625181 2492 ntBASIC17.41■□□□□ 0.38
IFNB1P01574 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC17.41■□□□□ 0.38
IFNB1P01574 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
IFNB1P01574 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC17.4■□□□□ 0.38
IFNB1P01574 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
IFNB1P01574 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
IFNB1P01574 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
IFNB1P01574 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
IFNB1P01574 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
IFNB1P01574 AL391005.1-201ENST00000623953 2435 ntBASIC17.4■□□□□ 0.38
IFNB1P01574 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
IFNB1P01574 NCF1C-201ENST00000438382 1427 ntBASIC17.4■□□□□ 0.38
IFNB1P01574 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
IFNB1P01574 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
IFNB1P01574 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
IFNB1P01574 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
IFNB1P01574 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
IFNB1P01574 CYP2T1P-202ENST00000641596 2535 ntBASIC17.4■□□□□ 0.38
IFNB1P01574 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
IFNB1P01574 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC17.4■□□□□ 0.38
IFNB1P01574 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC17.4■□□□□ 0.38
IFNB1P01574 AC106795.1-205ENST00000512851 1056 ntBASIC17.4■□□□□ 0.38
IFNB1P01574 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC17.4■□□□□ 0.38
IFNB1P01574 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC17.4■□□□□ 0.38
IFNB1P01574 NKAPP1-205ENST00000585790 367 ntBASIC17.4■□□□□ 0.38
IFNB1P01574 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
IFNB1P01574 TERC-201ENST00000602385 541 ntBASIC17.4■□□□□ 0.38
IFNB1P01574 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC17.4■□□□□ 0.38
IFNB1P01574 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
IFNB1P01574 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
IFNB1P01574 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
IFNB1P01574 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC17.4■□□□□ 0.38
IFNB1P01574 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC17.4■□□□□ 0.38
IFNB1P01574 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
IFNB1P01574 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
IFNB1P01574 AC026691.1-201ENST00000602502 2017 ntBASIC17.4■□□□□ 0.38
IFNB1P01574 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC17.4■□□□□ 0.38
IFNB1P01574 PCDHA1-201ENST00000378133 2726 ntBASIC17.4■□□□□ 0.38
IFNB1P01574 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
IFNB1P01574 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
IFNB1P01574 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
IFNB1P01574 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
IFNB1P01574 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
IFNB1P01574 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC17.39■□□□□ 0.38
IFNB1P01574 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC17.39■□□□□ 0.38
IFNB1P01574 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC17.39■□□□□ 0.38
IFNB1P01574 FUK-207ENST00000571514 3054 ntTSL 2 BASIC17.39■□□□□ 0.38
IFNB1P01574 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
IFNB1P01574 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
IFNB1P01574 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
IFNB1P01574 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
IFNB1P01574 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
IFNB1P01574 FLJ16779-201ENST00000612722 7638 ntBASIC17.39■□□□□ 0.37
IFNB1P01574 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
IFNB1P01574 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
IFNB1P01574 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
IFNB1P01574 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
IFNB1P01574 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
IFNB1P01574 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
IFNB1P01574 PRYP5-201ENST00000451909 266 ntBASIC17.39■□□□□ 0.37
IFNB1P01574 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC17.39■□□□□ 0.37
IFNB1P01574 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC17.39■□□□□ 0.37
IFNB1P01574 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
IFNB1P01574 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
IFNB1P01574 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
IFNB1P01574 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC17.39■□□□□ 0.37
IFNB1P01574 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC17.39■□□□□ 0.37
IFNB1P01574 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC17.39■□□□□ 0.37
IFNB1P01574 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC17.39■□□□□ 0.37
IFNB1P01574 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
IFNB1P01574 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
IFNB1P01574 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC17.38■□□□□ 0.37
IFNB1P01574 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
IFNB1P01574 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
IFNB1P01574 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
IFNB1P01574 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC17.38■□□□□ 0.37
IFNB1P01574 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC17.38■□□□□ 0.37
IFNB1P01574 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
IFNB1P01574 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
IFNB1P01574 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
IFNB1P01574 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 64.8 ms