Protein–RNA interactions for Protein: O96005

CLPTM1, Cleft lip and palate transmembrane protein 1, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1O96005 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CLPTM1O96005 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
CLPTM1O96005 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CLPTM1O96005 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CLPTM1O96005 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CLPTM1O96005 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CLPTM1O96005 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CLPTM1O96005 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CLPTM1O96005 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CLPTM1O96005 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
CLPTM1O96005 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CLPTM1O96005 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CLPTM1O96005 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CLPTM1O96005 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CLPTM1O96005 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC15.91■□□□□ 0.14
CLPTM1O96005 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CLPTM1O96005 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CLPTM1O96005 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CLPTM1O96005 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
CLPTM1O96005 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
CLPTM1O96005 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC15.91■□□□□ 0.14
CLPTM1O96005 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CLPTM1O96005 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
CLPTM1O96005 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CLPTM1O96005 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC15.9■□□□□ 0.14
CLPTM1O96005 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC15.9■□□□□ 0.14
CLPTM1O96005 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CLPTM1O96005 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CLPTM1O96005 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC15.9■□□□□ 0.14
CLPTM1O96005 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC15.9■□□□□ 0.14
CLPTM1O96005 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CLPTM1O96005 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CLPTM1O96005 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC15.9■□□□□ 0.14
CLPTM1O96005 FAM8A6P-201ENST00000407496 1135 ntBASIC15.9■□□□□ 0.14
CLPTM1O96005 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CLPTM1O96005 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC15.9■□□□□ 0.14
CLPTM1O96005 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC15.9■□□□□ 0.14
CLPTM1O96005 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
CLPTM1O96005 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC15.9■□□□□ 0.14
CLPTM1O96005 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC15.9■□□□□ 0.14
CLPTM1O96005 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC15.9■□□□□ 0.14
CLPTM1O96005 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC15.9■□□□□ 0.14
CLPTM1O96005 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC15.9■□□□□ 0.14
CLPTM1O96005 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC15.9■□□□□ 0.14
CLPTM1O96005 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC15.9■□□□□ 0.14
CLPTM1O96005 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CLPTM1O96005 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
CLPTM1O96005 HOXB1-202ENST00000577092 1414 ntBASIC15.9■□□□□ 0.14
CLPTM1O96005 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CLPTM1O96005 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC15.9■□□□□ 0.14
CLPTM1O96005 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CLPTM1O96005 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
CLPTM1O96005 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
CLPTM1O96005 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
CLPTM1O96005 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
CLPTM1O96005 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CLPTM1O96005 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CLPTM1O96005 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CLPTM1O96005 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC15.9■□□□□ 0.14
CLPTM1O96005 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CLPTM1O96005 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC15.9■□□□□ 0.14
CLPTM1O96005 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC15.9■□□□□ 0.14
CLPTM1O96005 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CLPTM1O96005 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.14
CLPTM1O96005 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CLPTM1O96005 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CLPTM1O96005 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC15.89■□□□□ 0.13
CLPTM1O96005 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CLPTM1O96005 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC15.89■□□□□ 0.13
CLPTM1O96005 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
CLPTM1O96005 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
CLPTM1O96005 KRT8P7-201ENST00000533003 1432 ntBASIC15.89■□□□□ 0.13
CLPTM1O96005 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CLPTM1O96005 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
CLPTM1O96005 ARMC10P1-201ENST00000313754 855 ntBASIC15.89■□□□□ 0.13
CLPTM1O96005 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CLPTM1O96005 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CLPTM1O96005 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CLPTM1O96005 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CLPTM1O96005 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
CLPTM1O96005 SPDYE15P-201ENST00000424157 909 ntBASIC15.89■□□□□ 0.13
CLPTM1O96005 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CLPTM1O96005 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC15.89■□□□□ 0.13
CLPTM1O96005 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CLPTM1O96005 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CLPTM1O96005 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC15.89■□□□□ 0.13
CLPTM1O96005 HOMER2P1-201ENST00000455653 964 ntBASIC15.89■□□□□ 0.13
CLPTM1O96005 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CLPTM1O96005 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CLPTM1O96005 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CLPTM1O96005 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC15.89■□□□□ 0.13
CLPTM1O96005 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CLPTM1O96005 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
CLPTM1O96005 LINC01238-205ENST00000567549 1107 ntBASIC15.89■□□□□ 0.13
CLPTM1O96005 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC15.89■□□□□ 0.13
CLPTM1O96005 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
CLPTM1O96005 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CLPTM1O96005 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CLPTM1O96005 AL365209.1-201ENST00000624418 6473 ntBASIC15.89■□□□□ 0.13
CLPTM1O96005 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC15.89■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms