Protein–RNA interactions for Protein: O75487

GPC4, Glypican-4, humanhuman

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4O75487 OR7E14P-202ENST00000530490 1290 ntBASIC16.87■□□□□ 0.29
GPC4O75487 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC16.87■□□□□ 0.29
GPC4O75487 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC16.87■□□□□ 0.29
GPC4O75487 AC148477.8-201ENST00000624298 468 ntBASIC16.87■□□□□ 0.29
GPC4O75487 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC16.87■□□□□ 0.29
GPC4O75487 AC092053.1-201ENST00000605787 1936 ntBASIC16.87■□□□□ 0.29
GPC4O75487 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
GPC4O75487 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
GPC4O75487 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC16.87■□□□□ 0.29
GPC4O75487 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
GPC4O75487 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
GPC4O75487 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC16.87■□□□□ 0.29
GPC4O75487 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
GPC4O75487 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
GPC4O75487 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
GPC4O75487 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
GPC4O75487 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC16.87■□□□□ 0.29
GPC4O75487 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
GPC4O75487 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
GPC4O75487 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
GPC4O75487 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
GPC4O75487 GPR89P-201ENST00000407924 1495 ntBASIC16.86■□□□□ 0.29
GPC4O75487 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
GPC4O75487 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
GPC4O75487 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
GPC4O75487 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
GPC4O75487 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
GPC4O75487 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
GPC4O75487 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
GPC4O75487 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
GPC4O75487 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC16.86■□□□□ 0.29
GPC4O75487 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
GPC4O75487 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC16.86■□□□□ 0.29
GPC4O75487 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC16.86■□□□□ 0.29
GPC4O75487 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC16.86■□□□□ 0.29
GPC4O75487 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
GPC4O75487 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC16.86■□□□□ 0.29
GPC4O75487 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC16.86■□□□□ 0.29
GPC4O75487 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC16.86■□□□□ 0.29
GPC4O75487 AF186996.4-201ENST00000467186 377 ntBASIC16.86■□□□□ 0.29
GPC4O75487 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
GPC4O75487 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC16.86■□□□□ 0.29
GPC4O75487 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC16.86■□□□□ 0.29
GPC4O75487 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC16.86■□□□□ 0.29
GPC4O75487 AC124947.2-201ENST00000547118 1133 ntBASIC16.86■□□□□ 0.29
GPC4O75487 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC16.86■□□□□ 0.29
GPC4O75487 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC16.86■□□□□ 0.29
GPC4O75487 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC16.86■□□□□ 0.29
GPC4O75487 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC16.86■□□□□ 0.29
GPC4O75487 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC16.86■□□□□ 0.29
GPC4O75487 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC16.86■□□□□ 0.29
GPC4O75487 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC16.86■□□□□ 0.29
GPC4O75487 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
GPC4O75487 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
GPC4O75487 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
GPC4O75487 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
GPC4O75487 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
GPC4O75487 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
GPC4O75487 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
GPC4O75487 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
GPC4O75487 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
GPC4O75487 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC16.86■□□□□ 0.29
GPC4O75487 AC046158.3-201ENST00000624947 2558 ntBASIC16.85■□□□□ 0.29
GPC4O75487 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC16.85■□□□□ 0.29
GPC4O75487 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC16.85■□□□□ 0.29
GPC4O75487 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC16.85■□□□□ 0.29
GPC4O75487 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
GPC4O75487 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
GPC4O75487 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
GPC4O75487 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
GPC4O75487 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC16.85■□□□□ 0.29
GPC4O75487 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
GPC4O75487 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC16.85■□□□□ 0.29
GPC4O75487 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC16.85■□□□□ 0.29
GPC4O75487 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
GPC4O75487 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
GPC4O75487 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
GPC4O75487 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
GPC4O75487 KRT18P27-201ENST00000427733 1299 ntBASIC16.85■□□□□ 0.29
GPC4O75487 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
GPC4O75487 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC16.85■□□□□ 0.29
GPC4O75487 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC16.85■□□□□ 0.29
GPC4O75487 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC16.85■□□□□ 0.29
GPC4O75487 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC16.85■□□□□ 0.29
GPC4O75487 AC006557.2-201ENST00000592985 1240 ntBASIC16.85■□□□□ 0.29
GPC4O75487 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
GPC4O75487 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC16.85■□□□□ 0.29
GPC4O75487 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
GPC4O75487 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
GPC4O75487 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
GPC4O75487 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
GPC4O75487 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
GPC4O75487 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
GPC4O75487 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC16.85■□□□□ 0.29
GPC4O75487 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC16.85■□□□□ 0.29
GPC4O75487 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
GPC4O75487 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
GPC4O75487 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC16.85■□□□□ 0.29
GPC4O75487 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
GPC4O75487 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms